RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 KCNG3Q8TAE7 436 aa14.48□□□□□ -0.09
SDC4-201ENST00000372733 RLN3Q8WXF3 142 aa14.48□□□□□ -0.09
SDC4-201ENST00000372733 SAT2Q96F10 170 aaPredicted RBP14.48□□□□□ -0.09
SDC4-201ENST00000372733 SLC22A11Q9NSA0 550 aa14.48□□□□□ -0.09
SDC4-201ENST00000372733 WIF1Q9Y5W5 379 aa14.48□□□□□ -0.09
SDC4-201ENST00000372733 TRIOO75962 3097 aa14.48□□□□□ -0.09
SDC4-201ENST00000372733 PMS2P1A4D2B8 440 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 COLCA2A8K830 154 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 FBXO24O75426 580 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 EIF3GO75821 320 aaKnown RBP eCLIP14.47□□□□□ -0.09
SDC4-201ENST00000372733 Q7L0L9 218 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 LHFPL1Q86WI0 220 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 OR1L3Q8NH93 324 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 GPER1Q99527 375 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 EHFQ9NZC4 300 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 PLA2G2EQ9NZK7 142 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 OSGIN2Q9Y236 505 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 APOC1P02654 83 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 OPN1LWP04000 364 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 PTGFRP43088 359 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 OR3A2P47893 321 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 DHPSP49366 369 aaPredicted RBP14.47□□□□□ -0.09
SDC4-201ENST00000372733 F2RL1P55085 397 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 ZNF121P58317 390 aaPredicted RBP14.47□□□□□ -0.09
SDC4-201ENST00000372733 GPR85P60893 370 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 HABP2Q14520 560 aaPredicted RBP14.47□□□□□ -0.09
SDC4-201ENST00000372733 DEFB133Q30KQ1 61 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 Q6ZS52 159 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 ZNF304Q9HCX3 659 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 SERINC1Q9NRX5 453 aa14.47□□□□□ -0.09
SDC4-201ENST00000372733 KNG1P01042 644 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 GLAP06280 429 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 ACAA1P09110 424 aaPredicted RBP14.46□□□□□ -0.09
SDC4-201ENST00000372733 GIMD1P0DJR0 217 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 LAP3P28838 519 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 CSNK2A1P68400 391 aaPredicted RBP14.46□□□□□ -0.09
SDC4-201ENST00000372733 IL15RAQ13261 267 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 MFAP5Q13361 173 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 DHRS11Q6UWP2 260 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 PNLDC1Q8NA58 520 aaKnown RBP14.46□□□□□ -0.09
SDC4-201ENST00000372733 CSNK2A3Q8NEV1 391 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 NPRL2Q8WTW4 380 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 NECAB3Q96P71 396 aaPredicted RBP14.46□□□□□ -0.09
SDC4-201ENST00000372733 OCSTAMPQ9BR26 566 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 B3GAT1Q9P2W7 334 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 A0A1W2PPC4 97 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 ANKUB1A6NFN9 424 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 ZNF878C9JN71 531 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 PRSS44E7EML9 344 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 PET100P0DJ07 73 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 HKR1P10072 659 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 ZNF17P17021 662 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 SNU13P55769 128 aaKnown RBP14.46□□□□□ -0.09
SDC4-201ENST00000372733 SWI5Q1ZZU3 235 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 CARD17Q5XLA6 110 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 SKA3Q8IX90 412 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 ST8SIA1Q92185 356 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 C14orf79Q96F83 325 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 DNAJB11Q9UBS4 358 aa14.46□□□□□ -0.09
SDC4-201ENST00000372733 NPIPB13A6NJU9 1138 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 LIPT2A6NK58 231 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 NPIPB4C9JG80 1138 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 IFNA4P05014 189 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 OR8U9P0C7N5 309 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 ZNF708P17019 499 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 PTGER4P35408 488 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 SNRPEP62304 92 aaKnown RBP14.45□□□□□ -0.1
SDC4-201ENST00000372733 GALNTL5Q7Z4T8 443 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 OR56B1Q8NGI3 324 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 OR8U1Q8NH10 309 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 CLCC1Q96S66 551 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 SULT4A1Q9BR01 284 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 SMIM3Q9BZL3 60 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 PARP12Q9H0J9 701 aaKnown RBP14.45□□□□□ -0.1
SDC4-201ENST00000372733 CLEC1BQ9P126 229 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 KLHL13Q9P2N7 655 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 ASH2LQ9UBL3 628 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 CD5P06127 495 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 FCGR3AP08637 254 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 HSD11B2P80365 405 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 SPEM2Q0P670 501 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 BTNL8Q6UX41 500 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 Q6ZRG5 221 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 OR6S1Q8NH40 331 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 IGKV1-9A0A0C4DH69 117 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 C5orf63A6NC05 138 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 RER1O15258 196 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 HPNP05981 417 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 CBR1P16152 277 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 ARL4DP49703 201 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 SULT1A2P50226 295 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 CLRN1P58418 232 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 TMEM268Q5VZI3 342 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 FAM57BQ71RH2 274 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 TMPRSS9Q7Z410 1059 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 C1QL2Q7Z5L3 287 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 MISPQ8IVT2 679 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 OR51T1Q8NGJ9 327 aa14.45□□□□□ -0.1
SDC4-201ENST00000372733 AKR1E2Q96JD6 320 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms