RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 KLF7O75840 302 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-201ENST00000371817 HTRA3P83110 453 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 ABI3BPQ7Z7G0 1075 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 FUNDC1Q8IVP5 155 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 FUT9Q9Y231 359 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 SLC5A6Q9Y289 635 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 CADP27708 2225 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 ZNF840PA6NDX5 716 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 TMEM116Q8NCL8 245 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 JAM3Q9BX67 310 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 A0A0A6YYC8 382 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-201ENST00000371817 ARRDC5A6NEK1 342 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 I3L1I5 382 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-201ENST00000371817 GRPP07492 148 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 AESQ08117 197 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 TBC1D28Q2M2D7 210 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 SCCPDHQ8NBX0 429 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 TMED3Q9Y3Q3 217 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 ADPRHP54922 357 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 DHRS2Q13268 280 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 CLN3Q13286 438 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 HAPLN2Q9GZV7 340 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 HPP00738 406 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 TMEM267Q0VDI3 215 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-201ENST00000371817 PRRX2Q99811 253 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 SLC46A2Q9BY10 475 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 CXorf36Q9H7Y0 433 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 DEFB132Q7Z7B7 95 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 SLCO4A1Q96BD0 722 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 TEX37Q96LM6 180 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 CST5P28325 142 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-201ENST00000371817 DCCP43146 1447 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 PRLHRP49683 370 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 DLK1P80370 383 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 PAQR6Q6TCH4 344 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 AAED1Q7RTV5 226 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 TP53INP2Q8IXH6 220 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 RAB37Q96AX2 223 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 ANGPTL4Q9BY76 406 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 YLPM1P49750 1951 aaKnown RBP13.86□□□□□ -0.19
COL5A1-201ENST00000371817 M0R3E3 92 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 CORTO00230 105 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 MPC2O95563 127 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 LSM11P83369 360 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL5A1-201ENST00000371817 C1orf61Q13536 156 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 ELFN2Q5R3F8 820 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 C17orf78Q8N4C9 275 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 OR10AD1Q8NGE0 317 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 RHOVQ96L33 236 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 WFIKKN1Q96NZ8 548 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 CMC2Q9NRP2 79 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 MYLKQ15746 1914 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 FBXL6Q8N531 539 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 POLDIP2Q9Y2S7 368 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 AVPR2P30518 371 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 PTGFRP43088 359 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 OBP2AQ9NY56 170 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 OR4C46A6NHA9 309 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 UTS2O95399 124 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 EIF1P41567 113 aaKnown RBP13.86□□□□□ -0.19
COL5A1-201ENST00000371817 ELAVL1Q15717 326 aaKnown RBP13.86□□□□□ -0.19
COL5A1-201ENST00000371817 SHISA6Q6ZSJ9 500 aa13.86□□□□□ -0.19
COL5A1-201ENST00000371817 SERPINE3A8MV23 424 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 B4E171 279 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 SOD2P04179 222 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 C19orf57Q0VDD7 668 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 AQP6Q13520 282 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 VWA2Q5GFL6 755 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 Q5PR19 223 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 OR52E1Q8NGJ3 308 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 LINC00862A6NCI5 91 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 PRAMEF26H0Y7S4 382 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 PPP2CBP62714 309 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 NXPE3Q969Y0 559 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 Q96M85 177 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 TEX101Q9BY14 249 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 GLIPR2Q9H4G4 154 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 ANKRD36A6QL64 1941 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 DOCK6Q96HP0 2047 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 GCGP01275 180 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 DERL3Q96Q80 235 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 IFITM10A6NMD0 228 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 CLDN10P78369 228 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 PKDCCQ504Y2 493 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 ZNF385CQ66K41 422 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-201ENST00000371817 ETFBKMTQ8IXQ9 262 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 MDGA1Q8NFP4 955 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 MRPL37Q9BZE1 423 aaKnown RBP13.85□□□□□ -0.19
COL5A1-201ENST00000371817 NAGKQ9UJ70 344 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 HAAOP46952 286 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 BSXQ3C1V8 233 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 DLEU7Q6UYE1 221 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 C15orf39Q6ZRI6 1047 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 TMEM99Q8N816 258 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 POM121L2Q96KW2 1035 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 DLX1P56177 255 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 PRSS50Q9UI38 385 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 SRPK3Q9UPE1 567 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 A0A1B0GUL6 1792 aa13.85□□□□□ -0.19
COL5A1-201ENST00000371817 GPANK1O95872 356 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms