RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GSKIPQ9P0R6 139 aa10.32□□□□□ -0.76
SMARCA1-201ENST00000371121 BTBD17A6NE02 478 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 MKRN2OSH3BPM6 223 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 P2RY10O00398 339 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 FKTNO75072 461 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 SPARCP09486 303 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 IFI6P09912 130 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 HLA-DOBP13765 273 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 GPR3P46089 330 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 MAFIPQ8WZ33 124 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 FGF22Q9HCT0 170 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 PRSS37A4D1T9 235 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 H0YL77 283 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 IL2RGP31785 369 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 GRK6P43250 576 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 ZNF157P51786 506 aaPredicted RBP10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 FOXF1Q12946 379 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 ZNF321PQ8N8H1 164 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 CHST4Q8NCG5 386 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 C16orf52Q8NHV5 167 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 FRZBQ92765 325 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 RAB39BQ96DA2 213 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 MRPL37Q9BZE1 423 aaKnown RBP10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 TMEM14AQ9Y6G1 99 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 TSPAN15O95858 294 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 APLNRP35414 380 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 RSU1Q15404 277 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 ZNF664Q8N3J9 261 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 RAB42Q8N4Z0 105 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 FGGYQ96C11 551 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 HIST1H2BLQ99880 126 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 MAFFQ9ULX9 164 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 R4GMQ9 66 aa10.31□□□□□ -0.76
SMARCA1-201ENST00000371121 A0A1B0GV50 99 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 C11orf98E9PRG8 122 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 K7N7A8 449 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 SLC16A7O60669 478 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 TTRP02766 147 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 IL11P20809 199 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 FPR2P25090 351 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 TLX1P31314 330 aaPredicted RBP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 IGFALSP35858 605 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 CLDN6P56747 220 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 PKIAP61925 76 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 FOXK1P85037 733 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 BEND4Q6ZU67 534 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 OR10S1Q8NGN2 331 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 OR52N5Q8NH56 324 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 GFOD1Q9NXC2 390 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 VSX1Q9NZR4 365 aaPredicted RBP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 SLCO1B1Q9Y6L6 691 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 CELSR3Q9NYQ7 3312 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 TRBV23OR9-2A0A075B6M9 112 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 MANSC4A6NHS7 340 aaPredicted RBP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 IFNA17P01571 189 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 SLC35E2P0CK97 266 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 GZMBP10144 247 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 FCARP24071 287 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 TAS2R31P59538 309 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 BTG2P78543 158 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 ENPP2Q13822 863 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 DMRTC1Q5HYR2 192 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 COX15Q7KZN9 410 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 ZNF615Q8N8J6 731 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 SSC4DQ8WTU2 575 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 MRPL24Q96A35 216 aaKnown RBP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 ATG101Q9BSB4 218 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 FAM206AQ9NX38 181 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 FBLN5Q9UBX5 448 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 TP53TG5Q9Y2B4 290 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 PUS1Q9Y606 427 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 MYO7BQ6PIF6 2116 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 A0A1B0GW64 132 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 JTBO76095 146 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 MBPP02686 304 aaPredicted RBP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 ACY1Q03154 408 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 ZFP36L1Q07352 338 aaKnown RBP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 SSX2Q16385 188 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 ACKR1Q16570 336 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 DNLZQ5SXM8 178 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 C1orf140Q5VVS0 124 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 RPUSD3Q6P087 351 aaKnown RBP10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 HIST2H3AQ71DI3 136 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 LINC00346Q8IVM7 164 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 SLC26A10Q8NG04 563 aa10.3□□□□□ -0.76
SMARCA1-201ENST00000371121 TBPP20226 339 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 VIPR2P41587 438 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 SLC35A1P78382 337 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 RELQ04864 619 aaPredicted RBP10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 FMODQ06828 376 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 ZNF616Q08AN1 781 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 ERV3-1Q14264 604 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 UBE2V2Q15819 145 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 HIKESHIQ53FT3 197 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 WBP2NLQ6ICG8 309 aa10.29□□□□□ -0.76
SMARCA1-201ENST00000371121 Q7L0L9 218 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms