RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 HIST1H3AP68431 136 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 MRPS34P82930 218 aaKnown RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 SPHARQ15513 63 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SSX1Q16384 188 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CDONQ4KMG0 1287 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 RIPPLY2Q5TAB7 128 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 HIST2H3PS2Q5TEC6 136 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 C9orf135Q5VTT2 229 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 VWA1Q6PCB0 445 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TMEM88Q6PEY1 159 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TFAP2EQ6VUC0 442 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 PLEKHG7Q6ZR37 379 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 HIST2H3AQ71DI3 136 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZNF367Q7RTV3 350 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 LDLRAD3Q86YD5 345 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SKA3Q8IX90 412 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CNEP1R1Q8N9A8 125 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR10S1Q8NGN2 331 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR13F1Q8NGS4 319 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR52N1Q8NH53 320 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OTOSQ8NHW6 89 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ST7LQ8TDW4 575 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 THEM6Q8WUY1 208 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 APH1AQ96BI3 265 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 STARD4Q96DR4 205 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 YIPF6Q96EC8 236 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 FBXO17Q96EF6 278 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 WBP1Q96G27 269 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ALKBH3Q96Q83 286 aaPredicted RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 MGLLQ99685 303 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TTYH2Q9BSA4 534 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ABHD6Q9BV23 337 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZNF416Q9BWM5 594 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 NAA50Q9GZZ1 169 aaKnown RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 INPP5EQ9NRR6 644 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 GLRX2Q9NS18 164 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TMEM38BQ9NVV0 291 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 BABAM2Q9NXR7 383 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 PTTG2Q9NZH5 202 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CYB5R1Q9UHQ9 305 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TINAGQ9UJW2 476 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ERGIC3Q9Y282 383 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CAB39Q9Y376 341 aaPredicted RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 GRIP1Q9Y3R0 1128 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CEPT1Q9Y6K0 416 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 PCNX1Q96RV3 2341 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SMIM30A4D0T7 59 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 METTL15A6NJ78 407 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 MYL12BO14950 172 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 HOXD4P09016 255 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 PATE4P0C8F1 98 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OR8G3PP0DMU2 310 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 NR2C1P13056 603 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 B4GALT1P15291 398 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ZNF823P16415 610 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 MSR1P21757 451 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 PTGER4P35408 488 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 TIMP3P35625 211 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 WNT4P56705 351 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 LSM6P62312 80 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 ACTC1P68032 377 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ACTA1P68133 377 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 PMPCAQ10713 525 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 TPBGQ13641 420 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 EIF2B1Q14232 305 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 SF3B4Q15427 424 aaKnown RBP eCLIP3.07□□□□□ -1.92
MCF2-202ENST00000370573 RSPO1Q2MKA7 263 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 ARMCX4Q5H9R4 360 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 FAM27BQ5VT28 67 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 FBXW9Q5XUX1 488 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OR2A2Q6IF42 318 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SLC18B1Q6NT16 456 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 TMEM53Q6P2H8 277 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 LRRN1Q6UXK5 716 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 DCXRQ7Z4W1 244 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 KLBQ86Z14 1044 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 UBE2J2Q8N2K1 259 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 LRRC18Q8N456 261 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 SLC22A24Q8N4F4 322 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ZFP41Q8N8Y5 198 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OR6K3Q8NGY3 331 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 FCGR1BQ92637 280 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 AKAP1Q92667 903 aaKnown RBP eCLIP3.07□□□□□ -1.92
MCF2-202ENST00000370573 BCL2L2Q92843 193 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 PELI1Q96FA3 418 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 C4orf36Q96KX1 117 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 OR8B4Q96RC9 309 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 DCLRE1CQ96SD1 692 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 MND1Q9BWT6 205 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 RBM38Q9H0Z9 239 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 OPN3Q9H1Y3 402 aaPredicted RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 SIAEQ9HAT2 523 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ELOVL3Q9HB03 270 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 PNRC2Q9NPJ4 139 aaKnown RBP3.07□□□□□ -1.92
MCF2-202ENST00000370573 B3GAT2Q9NPZ5 323 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 ZNF224Q9NZL3 707 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 C11orf21Q9P2W6 132 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 LAMP5Q9UJQ1 280 aa3.07□□□□□ -1.92
MCF2-202ENST00000370573 CMAHPQ9Y471 501 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms