RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 A0A1B0GX30 115 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 AKR7A2O43488 359 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 TBX19O60806 448 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CST5P28325 142 aaPredicted RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CCSMST1Q4G0I0 132 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 OR4S1Q8NGB4 309 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 PHOSPHO2Q8TCD6 241 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 CXorf58Q96LI9 332 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 LRFN3Q9BTN0 628 aa11.3□□□□□ -0.6
HCFC1-202ENST00000369984 INTS1Q8N201 2190 aaKnown RBP11.3□□□□□ -0.6
HCFC1-202ENST00000369984 TMEM202A6NGA9 273 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 HOXA4Q00056 320 aaPredicted RBP11.29□□□□□ -0.6
HCFC1-202ENST00000369984 GTF3C1Q12789 2109 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 IL10RAQ13651 578 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 EDAQ92838 391 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 TMEM230Q96A57 120 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 C2orf50Q96LR7 162 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 FAAP24Q9BTP7 215 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 NDRG3Q9UGV2 375 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 PPT2Q9UMR5 302 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 R4GMQ9 66 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 M0R2Z0 102 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 FAM157BP0CG42 384 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 SLC19A1P41440 591 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 HAAOP46952 286 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 ADPRHP54922 357 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 DHODHQ02127 395 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF547Q8IVP9 402 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 OR2A1Q8NGT9 310 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 ADGRL4Q9HBW9 690 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 IGHV3-15A0A0B4J1V0 119 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 NUDT3O95989 172 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 CD3DP04234 171 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 EVX1P49640 407 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 TRMT12Q53H54 448 aaKnown RBP11.29□□□□□ -0.6
HCFC1-202ENST00000369984 RDH5Q92781 318 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 FAM131CQ96AQ9 280 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 S1PR5Q9H228 398 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 MSL2Q9HCI7 577 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 GPX5O75715 221 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 GPM6AP51674 278 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 ACSM5Q6NUN0 579 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 PAQR6Q6TCH4 344 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 ALKAL1Q6UXT8 129 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 FAM26EQ8N5C1 309 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 GABARAPL1Q9H0R8 117 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 BCL2L11O43521 198 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 TGFBR1P36897 503 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 DUSP2Q05923 314 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 OXA1LQ15070 435 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 COL5A1-AS1Q5SY13 56 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 BTNL3Q6UXE8 466 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 WDR61Q9GZS3 305 aaKnown RBP11.29□□□□□ -0.6
HCFC1-202ENST00000369984 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
HCFC1-202ENST00000369984 LILRA3Q8N6C8 439 aaPredicted RBP11.29□□□□□ -0.6
HCFC1-202ENST00000369984 OR2J1Q9GZK6 312 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 PBOV1Q9GZY1 135 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 ATAD5Q96QE3 1844 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
HCFC1-202ENST00000369984 UBALD1Q8TB05 177 aa11.29□□□□□ -0.6
HCFC1-202ENST00000369984 MYO7BQ6PIF6 2116 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ZAR1LA6NP61 321 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 STAC2Q6ZMT1 411 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ARHGEF39Q8N4T4 335 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 CRYGNQ8WXF5 182 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 WDR89Q96FK6 387 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ST3GAL6Q9Y274 331 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ICOSLGO75144 302 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF121P58317 390 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 TAS2R60P59551 318 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 MIDNQ504T8 468 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 EXD3Q8N9H8 876 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ATP5SQ99766 215 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 GPR31O00270 319 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 RPL18Q07020 188 aaKnown RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ALKBH6Q3KRA9 238 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 LRP11Q86VZ4 500 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 PRSS37A4D1T9 235 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 CRISP2P16562 243 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 IRS1P35568 1242 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 CLN3Q13286 438 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 NUDCD2Q8WVJ2 157 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 CITED2Q99967 270 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ZNF66Q6ZN08 573 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 C17orf78Q8N4C9 275 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 SDHBP21912 280 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 PCBP3P57721 371 aaKnown RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 FBXO46Q6PJ61 603 aaPredicted RBP11.28□□□□□ -0.6
HCFC1-202ENST00000369984 SLCO4A1Q96BD0 722 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
HCFC1-202ENST00000369984 ZP3P21754 424 aa11.27□□□□□ -0.6
HCFC1-202ENST00000369984 MMP15P51511 669 aa11.27□□□□□ -0.6
HCFC1-202ENST00000369984 SSBP1Q04837 148 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms