RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DUX4L2P0CJ85 424 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 DUX4L3P0CJ86 424 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 DUX4L4P0CJ87 422 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 DUX4L5P0CJ88 424 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 DUX4L6P0CJ89 424 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 DUX4L7P0CJ90 424 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 CFL1P23528 166 aaKnown RBP13.19□□□□□ -0.3
CKS1B-202ENST00000368436 HSD11B1P28845 292 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 NAA10P41227 235 aaPredicted RBP13.19□□□□□ -0.3
CKS1B-202ENST00000368436 CSNK2BP67870 215 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
CKS1B-202ENST00000368436 BRICD5Q6PL45 260 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 DUX4L9Q6RFH8 374 aaPredicted RBP13.19□□□□□ -0.3
CKS1B-202ENST00000368436 METAP1DQ6UB28 335 aaPredicted RBP13.19□□□□□ -0.3
CKS1B-202ENST00000368436 SLC36A1Q7Z2H8 476 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 VMO1Q7Z5L0 202 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 PIGWQ7Z7B1 504 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 SCCPDHQ8NBX0 429 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 LINC01006Q8NI28 216 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
CKS1B-202ENST00000368436 PPP1R3EQ9H7J1 279 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 CMC2Q9NRP2 79 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 ZNF319Q9P2F9 582 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 DUX4Q9UBX2 424 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 RNF114Q9Y508 228 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 VWFP04275 2813 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 GPR37O15354 613 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 CLPXO76031 633 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 ZNF3P17036 446 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 AMY2BP19961 511 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 TGM4P49221 684 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 GSK3AP49840 483 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 PROK1P58294 105 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 ZNF121P58317 390 aaPredicted RBP13.18□□□□□ -0.3
CKS1B-202ENST00000368436 MIDNQ504T8 468 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 ATPAF1Q5TC12 328 aaPredicted RBP13.18□□□□□ -0.3
CKS1B-202ENST00000368436 OR2T5Q6IEZ7 315 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 CD300LDQ6UXZ3 194 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 FAM57BQ71RH2 274 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 GALNT4Q8N4A0 578 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 CSNK2A3Q8NEV1 391 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 OR2T29Q8NH02 315 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 NPRL2Q8WTW4 380 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 INTS14Q96SY0 518 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 AMELYQ99218 206 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 PRPF19Q9UMS4 504 aaKnown RBP13.18□□□□□ -0.3
CKS1B-202ENST00000368436 ARL2BPQ9Y2Y0 163 aa13.18□□□□□ -0.3
CKS1B-202ENST00000368436 WNK1Q9H4A3 2382 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 FAM183AA6NL82 134 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 RIIAD1A6NNX1 92 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 M0QZ24 198 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 ACOT8O14734 319 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 TIMM23O14925 209 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 NDUFB3O43676 98 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 GSTT1P30711 240 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 OPRL1P41146 370 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 MXRA7P84157 204 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 SNCBQ16143 134 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 STUMQ69YW2 141 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 LCN8Q6JVE9 175 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 SHFQ7M4L6 423 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 ERI1Q8IV48 349 aaKnown RBP13.17□□□□□ -0.3
CKS1B-202ENST00000368436 PDZD9Q8IXQ8 264 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 TIGD4Q8IY51 512 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 ZSCAN4Q8NAM6 433 aaPredicted RBP13.17□□□□□ -0.3
CKS1B-202ENST00000368436 OR6N2Q8NGY6 317 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 C8orf46Q8TAG6 207 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 ITPKCQ96DU7 683 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 MICU1Q9BPX6 476 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 OR10A2Q9H208 303 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 DPAGT1Q9H3H5 408 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 RGCCQ9H4X1 137 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 REEP1Q9H902 201 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 MED20Q9H944 212 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 RHBDD3Q9Y3P4 386 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 SAMHD1Q9Y3Z3 626 aaKnown RBP13.17□□□□□ -0.3
CKS1B-202ENST00000368436 U3KQV3 271 aa13.17□□□□□ -0.3
CKS1B-202ENST00000368436 CDIPTO14735 213 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 DCTN3O75935 186 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 GLCEO94923 617 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 GNALP38405 381 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 IL5RAQ01344 420 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 ASPHD2Q6ICH7 369 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 GDPGP1Q6ZNW5 385 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 CMTM4Q8IZR5 234 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 ARHGAP24Q8N264 748 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 Q8N7P7 452 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 OR10Z1Q8NGY1 313 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 LRTOMTQ8WZ04 291 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 NIPSNAP1Q9BPW8 284 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 DCTN5Q9BTE1 182 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 PAPOLGQ9BWT3 736 aaKnown RBP13.16□□□□□ -0.3
CKS1B-202ENST00000368436 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 MMP27Q9H306 513 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 HAO2Q9NYQ3 351 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms