RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SSTR2P30874 369 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 LTBRP36941 435 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 PABPC1L2AQ5JQF8 200 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 C4orf45Q96LM5 186 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 FBXL2Q9UKC9 423 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 CDC42EP2O14613 210 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ZNHIT1O43257 154 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 MED6O75586 246 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 GGTLC2Q14390 218 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 SMIM21Q3B7S5 101 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ATPAF1Q5TC12 328 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-204ENST00000367248 GLCCI1Q86VQ1 547 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 LYSMD2Q8IV50 215 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 CCDC28AQ8IWP9 274 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 WDSUB1Q8N9V3 476 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 OR6K3Q8NGY3 331 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 OR6S1Q8NH40 331 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF416Q9BWM5 594 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ST3GAL6Q9Y274 331 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 GP1BAP07359 652 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 C1QL3Q5VWW1 255 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 H2BFWTQ7Z2G1 175 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 ATG4DQ86TL0 474 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-204ENST00000367248 OR2AK2Q8NG84 335 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 OR2AE1Q8NHA4 323 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 TAS2R5Q9NYW4 299 aa10.34□□□□□ -0.75
SYNE1-204ENST00000367248 SCN3AQ9NY46 2000 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 PRSS44E7EML9 344 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 LIFP15018 202 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 ATF1P18846 271 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 TAS2R30P59541 319 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF774Q6NX45 483 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 IL34Q6ZMJ4 242 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 DYNC2LI1Q8TCX1 351 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 IGHA2P01877 340 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 CDKN2AP42771 156 aaKnown RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 NCCRP1Q6ZVX7 275 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 RFESDQ8TAC1 157 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 SCNM1Q9BWG6 230 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 TERTO14746 1132 aaKnown RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 FBXO24O75426 580 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 LIMS3P0CW19 117 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 LIMS4P0CW20 117 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 CTLA4P16410 223 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 SPSB1Q96BD6 273 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 SEC22CQ9BRL7 303 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 SF3B5Q9BWJ5 86 aaKnown RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 TRAPPC4Q9Y296 219 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 PLPP3O14495 311 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 CYC1P08574 325 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 LUMP51884 338 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 KLF3P57682 345 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 HBG1P69891 147 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 HBG2P69892 147 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 MCHR2Q969V1 340 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF2Q9BSG1 426 aaPredicted RBP10.33□□□□□ -0.76
SYNE1-204ENST00000367248 RAB33BQ9H082 229 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 NRXN2Q9P2S2 1712 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 SLC17A2O00624 439 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 FUCA1P04066 466 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 OR5H8P0DN80 308 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 FAM109AQ8N4B1 249 aa10.33□□□□□ -0.76
SYNE1-204ENST00000367248 QSER1Q2KHR3 1735 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 A0A0D9SG52 128 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 SH2D7A6NKC9 451 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-204ENST00000367248 EPPINO95925 133 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A6P0DMU7 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A5P0DMU8 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A7P0DMV0 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A8P0DMV1 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A9P0DMV2 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 TGFBR1P36897 503 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A2Q5DJT8 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A1Q5HYN5 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 BTNL3Q6UXE8 466 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 RFPL4BQ6ZWI9 263 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 C9orf40Q8IXQ3 194 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF441Q8N8Z8 693 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CT45A3Q8NHU0 189 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 S1PR3Q99500 378 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 PILRAQ9UKJ1 303 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 DOCK3Q8IZD9 2030 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 A0A1W2PR77 199 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 TMEM127O75204 238 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 RPS2P15880 293 aaKnown RBP10.32□□□□□ -0.76
SYNE1-204ENST00000367248 FHL5Q5TD97 284 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 TMEM105Q8N8V8 129 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 YIPF6Q96EC8 236 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 PELI1Q96FA3 418 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 ZNF251Q9BRH9 671 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CROCCQ5TZA2 2017 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 ERGP11308 486 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CLINT1Q14677 625 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 SLC36A1Q7Z2H8 476 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 LSMEM1Q8N8F7 131 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 OR10R2Q8NGX6 335 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 C20orf85Q9H1P6 137 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 CACNA1EQ15878 2313 aa10.32□□□□□ -0.76
SYNE1-204ENST00000367248 A0A0B4J203 849 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms