RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 FAM3AP98173 230 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 CDK5Q00535 292 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 PAX8Q06710 450 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 BAMBIQ13145 260 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 SCGB2A2Q13296 93 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 GK3PQ14409 553 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 SNAPC1Q16533 368 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 PCK2Q16822 640 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 ZNF404Q494X3 552 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 TEX30Q5JUR7 227 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 WDR25Q64LD2 544 aaPredicted RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 BTNL3Q6UXE8 466 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 CD300LDQ6UXZ3 194 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 RBMS3Q6XE24 437 aaKnown RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 BRD3OSQ6XYD6 125 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 ZNF841Q6ZN19 808 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 SLC16A9Q7RTY1 509 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 BCDIN3DQ7Z5W3 292 aaKnown RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 KRT77Q7Z794 578 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 AMIGO2Q86SJ2 522 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 PDZD9Q8IXQ8 264 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 TIGD4Q8IY51 512 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 FGFRL1Q8N441 504 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 GCSAMQ8N6F7 178 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 TEX29Q8N6K0 151 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 OR8S1Q8NH09 359 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 PIGCQ92535 297 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 TFAP2CQ92754 450 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 POP5Q969H6 163 aaKnown RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 SEH1LQ96EE3 360 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 CENPNQ96H22 339 aaPredicted RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 CNBD2Q96M20 576 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 ZNF48Q96MX3 618 aaPredicted RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 JMJD8Q96S16 334 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 NUDT16L1Q9BRJ7 211 aaKnown RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 PCGF1Q9BSM1 259 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 C9orf16Q9BUW7 83 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 MARCH7Q9H992 704 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 FN3KRPQ9HA64 309 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 DDX28Q9NUL7 540 aaKnown RBP4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 ERVK-18Q9QC07 812 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 CTSZQ9UBR2 303 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 DNAJB11Q9UBS4 358 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 CLN8Q9UBY8 286 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 RHBDD3Q9Y3P4 386 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 PCDHGB5Q9Y5G0 923 aa4.41□□□□□ -1.7
RNU1-43P-201ENST00000365052 COL6A5A8TX70 2615 aa4.4□□□□□ -1.7
RNU1-43P-201ENST00000365052 TRAV40A0A0B4J280 105 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 PPIAL4CA0A0B4J2A2 164 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 IGHV2-70DA0A0C4DH43 119 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 KIR2DS1A0A191URI9 304 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 A0A1B0GW55 424 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 A0A1W2PRD5 423 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 A0A1W2PRF3 423 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 A0A1W2PRM7 423 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 TMEM89A2RUT3 159 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 ZNF850A8MQ14 1090 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 A8MXK9 166 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 ZNF701M0R085 212 aaPredicted RBP4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 LGALS8O00214 317 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DVL1O14640 695 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 CDIPTO14735 213 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 MAGEB4O15481 346 aaPredicted RBP4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 FSHBP01225 129 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 HMGN1P05114 100 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DUX4L2P0CJ85 424 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DUX4L3P0CJ86 424 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DUX4L4P0CJ87 422 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DUX4L5P0CJ88 424 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DUX4L6P0CJ89 424 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DUX4L7P0CJ90 424 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 HOXB6P17509 224 aaKnown RBP4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 EGR1P18146 543 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 FASP25445 335 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 GNALP38405 381 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 GATA4P43694 442 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 GSK3AP49840 483 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 FGF12P61328 243 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 CSNK2BP67870 215 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 PAX2Q02962 417 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 PRB3Q04118 309 aaPredicted RBP4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 ZNF181Q2M3W8 571 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DUX4L9Q6RFH8 374 aaPredicted RBP4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 DCDC5Q6ZRR9 648 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 KCTD8Q6ZWB6 473 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 USP43Q70EL4 1123 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 MOB3CQ70IA8 216 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 NLRC3Q7RTR2 1065 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 PRSS45Q7RTY3 260 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 WDR86Q86TI4 376 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 C11orf53Q8IXP5 236 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 PARP8Q8N3A8 854 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 GALNT4Q8N4A0 578 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 CELF2-AS1Q8N7Q2 184 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 C3orf56Q8N813 242 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 SPERTQ8NA61 448 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 TSPAN14Q8NG11 270 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 OR5K1Q8NHB7 308 aa4.4□□□□□ -1.71
RNU1-43P-201ENST00000365052 LRRC29Q8WV35 223 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms