RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 SFTPDP35247 375 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 APOBEC1P41238 236 aaKnown RBP16.45■□□□□ 0.22
SNX11-201ENST00000359238 SOX2P48431 317 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 ZNF41P51814 821 aaPredicted RBP16.45■□□□□ 0.22
SNX11-201ENST00000359238 FMODQ06828 376 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 MYBPHQ13203 477 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 MEP1BQ16820 701 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 LRRC69Q6ZNQ3 347 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 ZBTB8AQ96BR9 441 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 SEC22AQ96IW7 307 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 TMEM231Q9H6L2 316 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 SH2D2AQ9NP31 389 aa16.45■□□□□ 0.22
SNX11-201ENST00000359238 CDV3Q9UKY7 258 aaKnown RBP16.45■□□□□ 0.22
SNX11-201ENST00000359238 PHF3Q92576 2039 aaKnown RBP16.44■□□□□ 0.22
SNX11-201ENST00000359238 AKAP13Q12802 2813 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 MPZL1O95297 269 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 CAPZA1P52907 286 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 SLC25A1P53007 311 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 SUMO3P55854 103 aaPredicted RBP16.44■□□□□ 0.22
SNX11-201ENST00000359238 SSTP61278 116 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 RPL27P61353 136 aaKnown RBP16.44■□□□□ 0.22
SNX11-201ENST00000359238 GFOD2Q3B7J2 385 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 ASCL5Q7RTU5 278 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 NKD1Q969G9 470 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 JSRP1Q96MG2 331 aaPredicted RBP16.44■□□□□ 0.22
SNX11-201ENST00000359238 EMC6Q9BV81 110 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 CCSO14618 274 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 MAS1P04201 325 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 TACSTD2P09758 323 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 ZNF44P15621 663 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 CFPP27918 469 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 PRKXP51817 358 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 ALKBH1Q13686 389 aaKnown RBP16.44■□□□□ 0.22
SNX11-201ENST00000359238 EEF1A1P5Q5VTE0 462 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 DPY19L4Q7Z388 723 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 BAP18Q8IXM2 172 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 PSMF1Q92530 271 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 MNTQ99583 582 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 GHRLQ9UBU3 117 aa16.44■□□□□ 0.22
SNX11-201ENST00000359238 PTPRZ1P23471 2315 aaPredicted RBP16.43■□□□□ 0.22
SNX11-201ENST00000359238 FAM186AA6NE01 2351 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 TRAV8-7A0A075B6U6 113 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 TRBV5-7A0A0A0MS05 114 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 LIPT2A6NK58 231 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 OR8G3PP0DMU2 310 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 DNASE1L1P49184 302 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 NOVA1P51513 510 aaKnown RBP16.43■□□□□ 0.22
SNX11-201ENST00000359238 DRAM2Q6UX65 266 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 BIVMQ86UB2 503 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 TMEM200AQ86VY9 491 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 ZNF561Q8N587 486 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 OR51D1Q8NGF3 324 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 PAPOLGQ9BWT3 736 aaKnown RBP16.43■□□□□ 0.22
SNX11-201ENST00000359238 TXNIPQ9H3M7 391 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 SLC17A5Q9NRA2 495 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 SDHAF3Q9NRP4 125 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 B3GAT1Q9P2W7 334 aa16.43■□□□□ 0.22
SNX11-201ENST00000359238 PRSS37A4D1T9 235 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 PNLIPRP3Q17RR3 467 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 MST1LQ2TV78 715 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 CDNFQ49AH0 187 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 SLC25A53Q5H9E4 307 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 THOC3Q96J01 351 aaKnown RBP16.42■□□□□ 0.22
SNX11-201ENST00000359238 MRGPRX4Q96LA9 322 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 MRPL22Q9NWU5 206 aaKnown RBP16.42■□□□□ 0.22
SNX11-201ENST00000359238 TRBV23-1A0A0A0MS06 115 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 TEX13DA0A0J9YY54 714 aaPredicted RBP16.42■□□□□ 0.22
SNX11-201ENST00000359238 ZNF705EA8MWA4 302 aaPredicted RBP16.42■□□□□ 0.22
SNX11-201ENST00000359238 SLC16A7O60669 478 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 ZNF432O94892 652 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 HLA-AP01891 365 aaKnown RBP16.42■□□□□ 0.22
SNX11-201ENST00000359238 SERPINA7P05543 415 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 FAM157CP0CG43 387 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 AGAP20933 346 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 POU3F1Q03052 451 aaPredicted RBP16.42■□□□□ 0.22
SNX11-201ENST00000359238 EMC4Q5J8M3 183 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 ATP1A1-AS1Q5TC04 95 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 FAM220AQ7Z4H9 259 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 PAQR4Q8N4S7 273 aaPredicted RBP16.42■□□□□ 0.22
SNX11-201ENST00000359238 OR4K17Q8NGC6 315 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 OR6N2Q8NGY6 317 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 MFSD8Q8NHS3 518 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 TMEM41AQ96HV5 264 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 FRRS1LQ9P0K9 344 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 KCNG2Q9UJ96 466 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 B9D1Q9UPM9 204 aa16.42■□□□□ 0.22
SNX11-201ENST00000359238 H3BSH0 61 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 SMAD9O15198 467 aaKnown RBP16.41■□□□□ 0.22
SNX11-201ENST00000359238 UPK3AO75631 287 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 RPP14O95059 124 aaKnown RBP16.41■□□□□ 0.22
SNX11-201ENST00000359238 OR6A2O95222 327 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 FARS2O95363 451 aaKnown RBP16.41■□□□□ 0.22
SNX11-201ENST00000359238 AMY2AP04746 511 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 ZNF735P0CB33 412 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 RCC1P18754 421 aaPredicted RBP16.41■□□□□ 0.22
SNX11-201ENST00000359238 POU3F4P49335 361 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 AIMP2Q13155 320 aaKnown RBP16.41■□□□□ 0.22
SNX11-201ENST00000359238 TOMM20Q15388 145 aa16.41■□□□□ 0.22
SNX11-201ENST00000359238 ACER2Q5QJU3 275 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms