RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 KIRREL1Q96J84 757 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 OR10C1Q96KK4 312 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 RBM7Q9Y580 266 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 PCDHGA1Q9Y5H4 931 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 KIAA1549LQ6ZVL6 1849 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 IGLV1-36A0A0B4J1U3 117 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 IGHV3-15A0A0B4J1V0 119 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 ADAM10O14672 748 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 IGHG1P01857 330 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 SLC25A4P12235 298 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 IKZF1Q13422 519 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF674Q2M3X9 581 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 HFEQ30201 348 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 MIDNQ504T8 468 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 KIAA0895LQ68EN5 471 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 RBMS3Q6XE24 437 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 C6orf201Q7Z4U5 140 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 C2orf50Q96LR7 162 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 UTP23Q9BRU9 249 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 CNTNAP3Q9BZ76 1288 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF442Q9H7R0 627 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 CHST11Q9NPF2 352 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 KNTC1P50748 2209 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 A0A1W2PPH5 198 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 A6NCN8 305 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 HSPB6O14558 160 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 C1QL1O75973 258 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 SCGNO76038 276 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 BPNT1O95861 308 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 IFNA2P01563 188 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 TTRP02766 147 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 CHRM2P08172 466 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 QDPRP09417 244 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 NME1P15531 152 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 HIST1H1DP16402 221 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 S100A2P29034 98 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 GNRHRP30968 328 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 PNLIPRP2P54317 469 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 MTCP1P56278 107 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF345Q14585 488 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 PPA1Q15181 289 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 RAET1LQ5VY80 246 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 FBXW12Q6X9E4 464 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 TMEM182Q6ZP80 229 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 C9orf40Q8IXQ3 194 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 TMEM217Q8N7C4 229 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 OR9K2Q8NGE7 335 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 TCTEX1D2Q8WW35 142 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 CCNL2Q96S94 520 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 NRIP2Q9BQI9 281 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 HDHD3Q9BSH5 251 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 GPR173Q9NS66 373 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 FGF21Q9NSA1 209 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 C1orf123Q9NWV4 160 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 LPAR3Q9UBY5 353 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 FBXL17Q9UF56 701 aa5.84□□□□□ -1.47
CSDE1-203ENST00000358528 YBX2Q9Y2T7 364 aaKnown RBP5.84□□□□□ -1.47
CSDE1-203ENST00000358528 FANCMQ8IYD8 2048 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 TLCD2A6NGC4 264 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 UMAD1C9J7I0 102 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 SFT2D2O95562 160 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 CD8AP01732 235 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 LCATP04180 440 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 ZNF735P0CB33 412 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 DRD1P21728 446 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 CALCRP30988 508 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 LPAR6P43657 344 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 HOXA1P49639 335 aaPredicted RBP5.84□□□□□ -1.48
CSDE1-203ENST00000358528 RRADP55042 308 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 NDUFA6P56556 154 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 UNC119Q13432 240 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 NCMAPQ5T1S8 102 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 PGAP1Q75T13 922 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 STX12Q86Y82 276 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 ZNF784Q8NCA9 323 aaPredicted RBP5.84□□□□□ -1.48
CSDE1-203ENST00000358528 CYYR1Q96J86 154 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 FBRSQ9HAH7 460 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 MMP24Q9Y5R2 645 aa5.84□□□□□ -1.48
CSDE1-203ENST00000358528 AHCTF1Q8WYP5 2266 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 RALGAPA1Q6GYQ0 2036 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 TRBV23-1A0A0A0MS06 115 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 HSPB2A8KAH6 182 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 NPIPA2E9PIF3 369 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 NPIPA3F8WFD2 350 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 TXNDC12O95881 172 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 FABP1P07148 127 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 LAP3P28838 519 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 DCAF7P61962 342 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 GNMTQ14749 295 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 HSPB2Q16082 182 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 ANKRD55Q3KP44 614 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 PRSS54Q6PEW0 395 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 OR8U1Q8NH10 309 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 WBP1Q96G27 269 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 PFDN5Q99471 154 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 DEFB126Q9BYW3 111 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 RAB33BQ9H082 229 aa5.83□□□□□ -1.48
CSDE1-203ENST00000358528 FAM212BQ9NTI7 297 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-203ENST00000358528 PIGLQ9Y2B2 252 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms