RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 MYCBPQ99417 103 aaPredicted RBP17.11■□□□□ 0.33
CHRD-203ENST00000356534 TTTY10Q9BZA0 68 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 PBOV1Q9GZY1 135 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 POLR3KQ9Y2Y1 108 aaPredicted RBP17.11■□□□□ 0.33
CHRD-203ENST00000356534 GMPPBQ9Y5P6 360 aa17.11■□□□□ 0.33
CHRD-203ENST00000356534 ZNF816-ZNF321PA0A0X1KG74 233 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 hCG_1807616A0A1W2PRN6 198 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 TMEM210A6NLX4 147 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 CST4P01036 141 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 SNRPGP62308 76 aaKnown RBP17.1■□□□□ 0.33
CHRD-203ENST00000356534 ACTC1P68032 377 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 ACTA1P68133 377 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 MPPED2Q15777 294 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 ZIK1Q3SY52 487 aaPredicted RBP17.1■□□□□ 0.33
CHRD-203ENST00000356534 ZBTB37Q5TC79 503 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 DCDC5Q6ZRR9 648 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 OR8B3Q8NGG8 313 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 NEIL1Q96FI4 390 aaPredicted RBP17.1■□□□□ 0.33
CHRD-203ENST00000356534 RDH12Q96NR8 316 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 OR8B2Q96RD0 313 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 RNPEPL1Q9HAU8 725 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 TMEM165Q9HC07 324 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 C8orf4Q9NR00 106 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 OR5V1Q9UGF6 321 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 GTF2A1LQ9UNN4 478 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 R4GMQ9 66 aa17.1■□□□□ 0.33
CHRD-203ENST00000356534 NDUFA2O43678 99 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 BAG2O95816 211 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 GRPP07492 148 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 PMELP40967 661 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 MTNR1AP48039 350 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 LCN2P80188 198 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 PRDX4Q13162 271 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 OCLNQ16625 522 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 BCL2L15Q5TBC7 163 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 FAHD2BQ6P2I3 314 aaPredicted RBP17.09■□□□□ 0.33
CHRD-203ENST00000356534 ZNF771Q7L3S4 317 aaPredicted RBP17.09■□□□□ 0.33
CHRD-203ENST00000356534 FAM220AQ7Z4H9 259 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 THAP5Q7Z6K1 395 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 ZDHHC23Q8IYP9 409 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 GALNT4Q8N4A0 578 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 OR10H4Q8NGA5 316 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 FAHD2AQ96GK7 314 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 HIST1H2AAQ96QV6 131 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 TMEM246Q9BRR3 403 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 SSBP3Q9BWW4 388 aaPredicted RBP17.09■□□□□ 0.33
CHRD-203ENST00000356534 C1orf123Q9NWV4 160 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 RHBDD3Q9Y3P4 386 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 PCDHGB1Q9Y5G3 927 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
CHRD-203ENST00000356534 ATRQ13535 2644 aa17.08■□□□□ 0.33
CHRD-203ENST00000356534 TRAV38-1A0A0B4J264 116 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 PRR32B1ATL7 298 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 E9PQ18 207 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 LGALS8O00214 317 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 SULT1C4O75897 302 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 DHRS3O75911 302 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 GNB2P62879 340 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 PLEKHG7Q6ZR37 379 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 RFLNBQ8N5W9 214 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 YIPF7Q8N8F6 280 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 SEMA6DQ8NFY4 1073 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 OR1M1Q8NGA1 313 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 ITPKCQ96DU7 683 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 MRPL48Q96GC5 212 aaKnown RBP17.08■□□□□ 0.32
CHRD-203ENST00000356534 LYZL4Q96KX0 146 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 Q96MT0 163 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 TBX5Q99593 518 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 APOL4Q9BPW4 351 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 GPR84Q9NQS5 396 aa17.08■□□□□ 0.32
CHRD-203ENST00000356534 KIAA1324LA8MWY0 1029 aaPredicted RBP17.07■□□□□ 0.32
CHRD-203ENST00000356534 IGLV3-1P01715 115 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 WNT2P09544 360 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 ACKR3P25106 362 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 NPY4RP50391 375 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 RIPPLY1Q0D2K3 151 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 ZNF154Q13106 437 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 KRT74Q7RTS7 529 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 OR51E1Q8TCB6 317 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 PIGCQ92535 297 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 MBOAT4Q96T53 435 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 MRM2Q9UI43 246 aaKnown RBP17.07■□□□□ 0.32
CHRD-203ENST00000356534 METRNQ9UJH8 293 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 OR52A1Q9UKL2 312 aa17.07■□□□□ 0.32
CHRD-203ENST00000356534 A0A1W2PQL4 384 aaPredicted RBP17.06■□□□□ 0.32
CHRD-203ENST00000356534 OOEPA6NGQ2 149 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 METTL15A6NJ78 407 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 DHRS7CA6NNS2 312 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 ZNF850A8MQ14 1090 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 SRSF10O75494 262 aaKnown RBP17.06■□□□□ 0.32
CHRD-203ENST00000356534 ZNF205O95201 554 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 TTRP02766 147 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 PITPNBP48739 271 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 MFGE8Q08431 387 aaPredicted RBP17.06■□□□□ 0.32
CHRD-203ENST00000356534 HNRNPA0Q13151 305 aaKnown RBP17.06■□□□□ 0.32
CHRD-203ENST00000356534 ELMOD2Q8IZ81 293 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 CCDC54Q8NEL0 328 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 ZNF555Q8NEP9 628 aa17.06■□□□□ 0.32
CHRD-203ENST00000356534 FAM71F1Q96KD3 344 aaPredicted RBP17.06■□□□□ 0.32
CHRD-203ENST00000356534 TMPRSS13Q9BYE2 586 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms