RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 NWD2Q9ULI1 1742 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 MYH13Q9UKX3 1938 aa5.83□□□□□ -1.48
UPF2-201ENST00000356352 A0A0A6YYD5 115 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 LMO7DNF2Z398 122 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 FZD6O60353 706 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 DUS4LO95620 317 aaKnown RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 PGA3P0DJD8 388 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 HNF1AP20823 631 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 MMP15P51511 669 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 TMEM128Q5BJH2 165 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 STUMQ69YW2 141 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 FAHD1Q6P587 224 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 LYPD8Q6UX82 237 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 Q6ZNB5 142 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ZDHHC22Q8N966 263 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OR1L4Q8NGR5 311 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 TMED6Q8WW62 240 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ST8SIA4Q92187 359 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 RPEQ96AT9 228 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 NOL4LQ96MY1 436 aaPredicted RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 SRRQ9GZT4 340 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 LTB4R2Q9NPC1 389 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 A4GNTQ9UNA3 340 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 A0A087WUJ7 227 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 K7EQS6 105 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 GPX5O75715 221 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ALX3O95076 343 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 SLC2A10O95528 541 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 IL5P05113 134 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ARNTP27540 789 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 EVX1P49640 407 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 HFEQ30201 348 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 MOGAT2Q3SYC2 334 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PET117Q6UWS5 81 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 BATF2Q8N1L9 274 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 NECAP1Q8NC96 275 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ADPRHL1Q8NDY3 354 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OR2G2Q8NGZ5 317 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 EXTL1Q92935 676 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ADGRG7Q96K78 797 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 TEX37Q96LM6 180 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 UCK1Q9HA47 277 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 GLRX2Q9NS18 164 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 MED29Q9NX70 200 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 TAAR3PQ9P1P4 343 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CYB5R1Q9UHQ9 305 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ZNF320A2RRD8 509 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 POM121BA6NF01 834 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PRRT4C9JH25 899 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 MS4A18H0YCH9 400 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 SDCBPO00560 298 aaPredicted RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 TOX3O15405 576 aaPredicted RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 PIAS2O75928 621 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OR2J3O76001 311 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 IGLV3-25P01717 112 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 MYOGP15173 224 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OPRM1P35372 400 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 GPM6AP51674 278 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PCBP4P57723 403 aaKnown RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 CCL7P80098 99 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 HTRA4P83105 476 aaPredicted RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 ZNF816Q0VGE8 651 aaPredicted RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 MS4A18Q3C1V0 323 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 RNF212Q495C1 297 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OLIG3Q7RTU3 272 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 MARCH1Q8TCQ1 289 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 NUDCD2Q8WVJ2 157 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 RAB40CQ96S21 281 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 SEBOXQ9HB31 216 aaPredicted RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 TMED3Q9Y3Q3 217 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 DDX60Q8IY21 1712 aaKnown RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 IGHV3-15A0A0B4J1V0 119 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PRSS44E7EML9 344 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 SLC17A2O00624 439 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ICMTO60725 284 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 B3GALNT1O75752 331 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CXCL10P02778 98 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CD3DP04234 171 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 AREGP15514 252 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 GALP22466 123 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ERVFC1-1P60608 527 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PPP2CBP62714 309 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PPP2CAP67775 309 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CEACAM16Q2WEN9 425 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 TCTN3Q6NUS6 607 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 UBE3DQ7Z6J8 389 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CALHM3Q86XJ0 350 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OR1L1Q8NH94 360 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 RXFP4Q8TDU9 374 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ACY3Q96HD9 319 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CYSLTR2Q9NS75 346 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 AMDHD2Q9Y303 409 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 SPTY2D1-AS1A0A0U1RR47 76 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 UBE2L5PA0A1B0GUS4 154 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 TCRBV5S2A0A599 114 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 TCAPO15273 167 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 RBP4P02753 201 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CEACAM5P06731 702 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 APEHP13798 732 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms