RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HOGA1Q86XE5 327 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 LRRC18Q8N456 261 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 TERB2Q8NHR7 220 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 RBPMSQ93062 196 aaKnown RBP19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 SMOC1Q9H4F8 434 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 PADI1Q9ULC6 663 aa19.56■□□□□ 0.72
NKX2-1-201ENST00000354822 LOC100509620A0A075B734 347 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 OR5H15A6NDH6 313 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 OR2AT4A6NND4 320 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 E9PLN8 166 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 EFSO43281 561 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 DUS4LO95620 317 aaKnown RBP19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 M6PRP20645 277 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 ANOS1P23352 680 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 MPGP29372 298 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 RPS27AP62979 156 aaKnown RBP19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 ARL6IP1Q15041 203 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 SCGB3A2Q96PL1 93 aa19.55■□□□□ 0.72
NKX2-1-201ENST00000354822 hCG_1807616A0A1W2PRN6 198 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 M0R135 149 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 MFNGO00587 321 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 NAT2P11245 290 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 MGMTP16455 207 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF345Q14585 488 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 RSPO1Q2MKA7 263 aaPredicted RBP19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF468Q5VIY5 522 aaPredicted RBP19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 RGS7BPQ6MZT1 257 aaPredicted RBP19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 C11orf87Q6NUJ2 197 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 OR52H1Q8NGJ2 320 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 LRRC20Q8TCA0 184 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 FBXW5Q969U6 566 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF799Q96GE5 643 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 CHST5Q9GZS9 411 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 PLEK2Q9NYT0 353 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF230Q9UIE0 474 aaPredicted RBP19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 NUP50Q9UKX7 468 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 PCDHGA1Q9Y5H4 931 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 OR2F2O95006 317 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 NMBP08949 121 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 ACP1P24666 158 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 OR2F1Q13607 317 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 ALKAL2Q6UX46 152 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 OR51T1Q8NGJ9 327 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 NECAB3Q96P71 396 aaPredicted RBP19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF224Q9NZL3 707 aa19.54■□□□□ 0.72
NKX2-1-201ENST00000354822 B3GALT5-AS1P59052 145 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 MICBQ29980 383 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF528Q3MIS6 628 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 COQ8AQ8NI60 647 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 C17orf50Q8WW18 174 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 ARHGAP5-AS1Q96IT6 56 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 S100A13Q99584 98 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 SRXN1Q9BYN0 137 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 NCOA6Q14686 2063 aaPredicted RBP19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 CEACAM18A8MTB9 384 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 M0R296 226 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF883P0CG24 379 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 POU3F2P20265 443 aaPredicted RBP19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 CARD18P57730 90 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 ARFRP1Q13795 201 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 ZNF660Q6AZW8 331 aaPredicted RBP19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 SLC16A14Q7RTX9 510 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 PPP1R32Q7Z5V6 425 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 SUN5Q8TC36 379 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 HAS2Q92819 552 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 TCFL5Q9UL49 500 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 MED12Q93074 2177 aa19.53■□□□□ 0.72
NKX2-1-201ENST00000354822 SMAD9O15198 467 aaKnown RBP19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 LIPCP11150 499 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 AKR1C4P17516 323 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 UBA52P62987 128 aaKnown RBP19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 SSPNQ14714 243 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 UBE2V2Q15819 145 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 RTL6Q6ICC9 239 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 TMEM17Q86X19 198 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 KCNRGQ8N5I3 272 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 OR5M9Q8NGP3 310 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 OR14L1PQ8NHC6 308 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 ST8SIA4Q92187 359 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 LIN37Q96GY3 246 aaPredicted RBP19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 PFDN2Q9UHV9 154 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 TNFSF18Q9UNG2 199 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 PIGLQ9Y2B2 252 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 SESN1Q9Y6P5 492 aa19.52■□□□□ 0.72
NKX2-1-201ENST00000354822 A0A1W2PP11 408 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 C5orf63A6NC05 138 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 DHRS7CA6NNS2 312 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 STMND1H3BQB6 276 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 HPP00738 406 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 ZNF250P15622 560 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 VAMP1P23763 118 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 ARPC4P59998 168 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 TMEM128Q5BJH2 165 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 H3F3CQ6NXT2 135 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 DRAM2Q6UX65 266 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 ZBTB44Q8NCP5 570 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 ADAD2Q8NCV1 583 aaKnown RBP19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 TMEM185AQ8NFB2 350 aa19.51■□□□□ 0.71
NKX2-1-201ENST00000354822 MARCH1Q8TCQ1 289 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms