RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 RFPL3SP0C7P2 107 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 CDK2P24941 298 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 HSD11B1P28845 292 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 GDNFP39905 211 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 RFC3P40938 356 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 GUCA1AP43080 201 aaPredicted RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 PTH2RP49190 550 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 EIF2B2P49770 351 aaKnown RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 ZNF84P51523 738 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 TAS2R20P59543 309 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 MRPS34P82930 218 aaKnown RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 SSBP1Q04837 148 aaKnown RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 CD300CQ08708 224 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 MADCAM1Q13477 382 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 ENDOGQ14249 297 aaKnown RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 HYAL4Q2M3T9 481 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 ELFN2Q5R3F8 820 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 C1orf100Q5SVJ3 147 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 TMEM69Q5SWH9 247 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 RIPPLY2Q5TAB7 128 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 RSBN1Q5VWQ0 802 aaPredicted RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 CARD17Q5XLA6 110 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 OLFML2AQ68BL7 652 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 CORO6Q6QEF8 472 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 LINGO2Q7L985 606 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 CDH26Q8IXH8 852 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 OR6N1Q8NGY5 312 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 OR6F1Q8NGZ6 308 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 SLC7A6Q92536 515 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 PIGTQ969N2 578 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 SLC25A28Q96A46 364 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 FAM3DQ96BQ1 224 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 UPRTQ96BW1 309 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 UCN2Q96RP3 112 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 PBOV1Q9GZY1 135 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 DPAGT1Q9H3H5 408 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 SEC61A2Q9H9S3 476 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 EMC7Q9NPA0 242 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 CENPMQ9NSP4 180 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 TAS2R4Q9NYW5 299 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 KLF13Q9Y2Y9 288 aaPredicted RBP7.15□□□□□ -1.26
CD44-205ENST00000352818 RHBDD3Q9Y3P4 386 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 NUBP2Q9Y5Y2 271 aa7.15□□□□□ -1.26
CD44-205ENST00000352818 A0A1B0GTI1 187 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 TMEM272A0A1B0GTI8 110 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 A0A1B0GVC2 190 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 A0A1B0GVI7 797 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ANKRD20A5PA0PJZ0 165 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 C7orf66A4D0T2 115 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 PINLYPA6NC86 204 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 GGT3PA6NGU5 568 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 A6NIN4 97 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 A8MV72 311 aaPredicted RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 H0YC42 278 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 EIF1AYO14602 144 aaKnown RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 SIAH2O43255 324 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 SYT7O43581 403 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 CCNKO75909 580 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 IGLV3-1P01715 115 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ERCC1P07992 297 aaPredicted RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 ITGA5P08648 1049 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 CD3GP09693 182 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 GSTT2BP0CG30 244 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 GABRA1P14867 456 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 RAB6AP20340 208 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 GDF1P27539 372 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 OTX1P32242 354 aaPredicted RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 CDAP32320 146 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 POU3F4P49335 361 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 CLDN12P56749 244 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 CARD18P57730 90 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 OC90Q02509 493 aaPredicted RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 BCL2A1Q16548 175 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 TATDN3Q17R31 274 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ODF4Q2M2E3 257 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 FBXL19-AS1Q494R0 122 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 NRN1LQ496H8 165 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 WIPI1Q5MNZ9 446 aaPredicted RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 SLC25A25Q6KCM7 469 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 DOK3Q7L591 496 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 PRSS45Q7RTY3 260 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ADGRE4PQ86SQ3 457 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 YRDCQ86U90 279 aaKnown RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 SERPINA12Q8IW75 414 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 GPR137CQ8N3F9 429 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 DNAAF1Q8NEP3 725 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 GJC3Q8NFK1 279 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 OR5M9Q8NGP3 310 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 OR10D3Q8NH80 312 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 RNASE6Q93091 150 aaKnown RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 PPP1R14AQ96A00 147 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ZFP3Q96NJ6 502 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 UQCC2Q9BRT2 126 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 TRAF4Q9BUZ4 470 aaPredicted RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 ZNF416Q9BWM5 594 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 ULBP2Q9BZM5 246 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 MOV10Q9HCE1 1003 aaKnown RBP7.14□□□□□ -1.27
CD44-205ENST00000352818 DIABLOQ9NR28 239 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 EMC3Q9P0I2 261 aa7.14□□□□□ -1.27
CD44-205ENST00000352818 NLKQ9UBE8 527 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms