RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 NPEPL1Q8NDH3 523 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ADPRHL1Q8NDY3 354 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ZNF75AQ96N20 296 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 HES4Q9HCC6 221 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 AMDHD2Q9Y303 409 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 STRCQ7RTU9 1775 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 MN1Q10571 1320 aaPredicted RBP13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ZFP92A6NM28 416 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 CD160O95971 181 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ELLP55199 621 aaPredicted RBP13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ZIC1Q15915 447 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ASB5Q8WWX0 329 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 SLC7A6Q92536 515 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 EXTL1Q92935 676 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 FOXJ3Q9UPW0 622 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 SMCHD1A6NHR9 2005 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 OR2M5A3KFT3 312 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 SPRY1O43609 319 aaPredicted RBP13.83□□□□□ -0.2
PTPRO-202ENST00000348962 EPPINO95925 133 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 DTYMKP23919 212 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 MCCD1P59942 119 aaPredicted RBP13.83□□□□□ -0.2
PTPRO-202ENST00000348962 PNLIPRP3Q17RR3 467 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ISXQ2M1V0 245 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 CD276Q5ZPR3 534 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 CXorf67Q86X51 503 aaPredicted RBP13.83□□□□□ -0.2
PTPRO-202ENST00000348962 SFT2D1Q8WV19 159 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 ANGPTL7O43827 346 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 KIAA0040Q15053 153 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 MOB1BQ7L9L4 216 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 MCHR2Q969V1 340 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 GNPNAT1Q96EK6 184 aaPredicted RBP13.83□□□□□ -0.2
PTPRO-202ENST00000348962 AKR1E2Q96JD6 320 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 MBD1Q9UIS9 605 aaPredicted RBP13.83□□□□□ -0.2
PTPRO-202ENST00000348962 PCOLCE2Q9UKZ9 415 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 LAMB1P07942 1786 aa13.83□□□□□ -0.2
PTPRO-202ENST00000348962 RPS10-NUDT3A0A1W2PQS6 291 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 AQP7P3A6NL99 342 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 POM121CA8CG34 1229 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 RPS10P46783 165 aaKnown RBP13.82□□□□□ -0.2
PTPRO-202ENST00000348962 BTNL3Q6UXE8 466 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 LFNGQ8NES3 379 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 TM4SF19Q96DZ7 209 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 DVL1O14640 695 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 GALNSP34059 522 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 DVL1P1P54792 670 aaPredicted RBP13.82□□□□□ -0.2
PTPRO-202ENST00000348962 PRDX4Q13162 271 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 DCAF10Q5QP82 559 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 CALHM3Q86XJ0 350 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 NPAP1Q9NZP6 1156 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 PURGQ9UJV8 347 aaKnown RBP13.82□□□□□ -0.2
PTPRO-202ENST00000348962 SEC16AO15027 2179 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 A0A1W2PQF6 199 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 B4E171 279 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 CA6P23280 308 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 TSPAN7P41732 249 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 UBE2IP63279 158 aaKnown RBP13.82□□□□□ -0.2
PTPRO-202ENST00000348962 CCDC71Q8IV32 467 aaPredicted RBP13.82□□□□□ -0.2
PTPRO-202ENST00000348962 KDF1Q8NAX2 398 aaPredicted RBP13.82□□□□□ -0.2
PTPRO-202ENST00000348962 C17orf50Q8WW18 174 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 RTN4IP1Q8WWV3 396 aaPredicted RBP13.82□□□□□ -0.2
PTPRO-202ENST00000348962 SLC17A2O00624 439 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 RER1O15258 196 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 TXNL1O43396 289 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 PNLIPP16233 465 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 FMODQ06828 376 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 STUMQ69YW2 141 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 ZNF774Q6NX45 483 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 MRGPREQ86SM8 312 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 WDR54Q9H977 334 aa13.82□□□□□ -0.2
PTPRO-202ENST00000348962 NGFP01138 241 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
PTPRO-202ENST00000348962 ZBTB25P24278 435 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 CEACAM3P40198 252 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 MOB3AQ96BX8 217 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 CHST6Q9GZX3 395 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 FBXO34Q9NWN3 711 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 AHCTF1Q8WYP5 2266 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 CDX4O14627 284 aaPredicted RBP13.81□□□□□ -0.2
PTPRO-202ENST00000348962 SIX6O95475 246 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 DGCR2P98153 550 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 GAB4Q2WGN9 574 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 OR10AD1Q8NGE0 317 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 OR5D13Q8NGL4 314 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 POM121L2Q96KW2 1035 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 SF3B5Q9BWJ5 86 aaKnown RBP13.81□□□□□ -0.2
PTPRO-202ENST00000348962 ZNF354AO60765 605 aaPredicted RBP13.81□□□□□ -0.2
PTPRO-202ENST00000348962 MOSPD3O75425 235 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 PPP1CBP62140 327 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 FABP5Q01469 135 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 DOK1Q99704 481 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 GAL3ST2Q9H3Q3 398 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 SAV1Q9H4B6 383 aaPredicted RBP13.81□□□□□ -0.2
PTPRO-202ENST00000348962 TRAPPC4Q9Y296 219 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 USP54Q70EL1 1684 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 hADV38S2A0JD32 116 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 C20orf202A1L168 122 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 CCSO14618 274 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 DHRS3O75911 302 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 CASP3P42574 277 aa13.81□□□□□ -0.2
PTPRO-202ENST00000348962 SPAG17Q6Q759 2223 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms