RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 FDX2Q6P4F2 183 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 PLXDC2Q6UX71 529 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF574Q6ZN55 896 aaPredicted RBP13.19□□□□□ -0.3
CLCN1-201ENST00000343257 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 PMM1Q92871 262 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 MRPL24Q96A35 216 aaKnown RBP13.19□□□□□ -0.3
CLCN1-201ENST00000343257 VWCEQ96DN2 955 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 GPER1Q99527 375 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 WFDC1Q9HC57 220 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF107Q9UII5 783 aaPredicted RBP13.19□□□□□ -0.3
CLCN1-201ENST00000343257 F5P12259 2224 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 BTBD17A6NE02 478 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 SLC33A1O00400 549 aaPredicted RBP13.19□□□□□ -0.3
CLCN1-201ENST00000343257 SOD3P08294 240 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 CFPP27918 469 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 RBMXP38159 391 aaKnown RBP13.19□□□□□ -0.3
CLCN1-201ENST00000343257 RGS19P49795 217 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 RBP2P50120 134 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 RAB38P57729 211 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 HMGN3Q15651 99 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 SUMF2Q8NBJ7 301 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 C19orf12Q9NSK7 152 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 JTBO76095 146 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 HOXC4P09017 264 aaPredicted RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 RPL27P61353 136 aaKnown RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 HAGHQ16775 308 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 HEPN1Q6WQI6 88 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 STX12Q86Y82 276 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 SLC26A10Q8NG04 563 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 PRRX2Q99811 253 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 ABHD14AQ9BUJ0 271 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 CRLF2Q9HC73 371 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF701Q9NV72 531 aaPredicted RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 IGLV1-36A0A0B4J1U3 117 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 IGKV1D-43A0A0B4J1Z2 117 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 CYB5BO43169 146 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 TRGC2P03986 189 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 FSTP19883 344 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 PTGER4P35408 488 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 CCL20P78556 96 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 EMC4Q5J8M3 183 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 SCARF2Q96GP6 870 aaPredicted RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 LPAR5Q9H1C0 372 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 SLC35B3Q9H1N7 401 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 NELFAQ9H3P2 528 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 OPA3Q9H6K4 179 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 UNKLQ9H9P5 680 aaKnown RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 PRTFDC1Q9NRG1 225 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 PNO1Q9NRX1 252 aaKnown RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 DNAJB11Q9UBS4 358 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 MEMO1Q9Y316 297 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 HDGFL3Q9Y3E1 203 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF878C9JN71 531 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 UTS2O95399 124 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 SNU13P55769 128 aaKnown RBP13.18□□□□□ -0.3
CLCN1-201ENST00000343257 TMEM50BP56557 158 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 ACY1Q03154 408 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 KIR2DS3Q14952 304 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 CNKSR3Q6P9H4 555 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 WDFY1Q8IWB7 410 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 SLC22A24Q8N4F4 322 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 AVL9Q8NBF6 648 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 FNDC9Q8TBE3 224 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 NTNG2Q96CW9 530 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 OR8D2Q9GZM6 311 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 HS3ST3B1Q9Y662 390 aa13.18□□□□□ -0.3
CLCN1-201ENST00000343257 CDRT15L2A8MXV6 281 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 H0YL77 283 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 TAAR5O14804 337 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
CLCN1-201ENST00000343257 THBS4P35443 961 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 C17orf78Q8N4C9 275 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 OR51E1Q8TCB6 317 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 Q8WTZ3 238 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 FAM71F1Q96KD3 344 aaPredicted RBP13.17□□□□□ -0.3
CLCN1-201ENST00000343257 NXF5Q9H1B4 397 aaKnown RBP13.17□□□□□ -0.3
CLCN1-201ENST00000343257 TUBA4BQ9H853 241 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 ELL3Q9HB65 397 aaPredicted RBP13.17□□□□□ -0.3
CLCN1-201ENST00000343257 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 MRPS28Q9Y2Q9 187 aaKnown RBP13.17□□□□□ -0.3
CLCN1-201ENST00000343257 RHBDD3Q9Y3P4 386 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 LINC01553A4QN01 128 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 PHOX2AO14813 284 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 HCKP08631 526 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 CSF2RAP15509 400 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 DDTP30046 118 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 GLO1Q04760 184 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 AADACL3Q5VUY0 350 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 P4HA3Q7Z4N8 544 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF610Q8N9Z0 462 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 DTWD2Q8NBA8 298 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 DEFB118Q96PH6 123 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 MESP1Q9BRJ9 268 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms