RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 IL2RAP01589 272 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 SDC1P18827 310 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 VCX2Q9H322 139 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 TAAR2Q9P1P5 351 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 CTDSP2O14595 271 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 ADAM20O43506 726 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 SLC16A12Q6ZSM3 486 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 MED25Q71SY5 747 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 MDGA1Q8NFP4 955 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 TMEM37Q8WXS4 190 aa16.05■□□□□ 0.16
SMAD4-201ENST00000342988 OR2A25A4D2G3 310 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 CRYAAP02489 173 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 OR2G2Q8NGZ5 317 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 SLC30A3Q99726 388 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 ZNF26P17031 533 aaPredicted RBP16.04■□□□□ 0.16
SMAD4-201ENST00000342988 ASAH1Q13510 395 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 FZD2Q14332 565 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 CBARPQ8N350 705 aaPredicted RBP16.04■□□□□ 0.16
SMAD4-201ENST00000342988 TMEM102Q8N9M5 508 aaPredicted RBP16.04■□□□□ 0.16
SMAD4-201ENST00000342988 CLDN23Q96B33 292 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 BANF2Q9H503 90 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 PSG11Q9UQ72 335 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 HAND1O96004 215 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 CCL11P51671 97 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 FAM189BP81408 668 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 LYG2Q86SG7 212 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 CLEC14AQ86T13 490 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 SERTM1A2A2V5 107 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 YPEL5P62699 121 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 LIPIQ6XZB0 460 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 PQLC3Q8N755 202 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 FAHD2AQ96GK7 314 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 PSORS1C1Q9UIG5 152 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 FAM74A3Q4VXF1 159 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 OR2G6Q5TZ20 316 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 NCOR1O75376 2440 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 ZNF840PA6NDX5 716 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 TNFRSF1AP19438 455 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 A0A1B0GUL6 1792 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 RGPD5Q99666 1765 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 M0R1B8 84 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 SHC1P29353 583 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 CXCL12P48061 93 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 PROCRQ9UNN8 238 aa16.04■□□□□ 0.16
SMAD4-201ENST00000342988 OR4E1P0C645 316 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 ZBTB44Q8NCP5 570 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 DTD2Q96FN9 168 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 LOC107984156A0A0G2JMH3 177 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 SMAD2Q15796 467 aaKnown RBP16.03■□□□□ 0.16
SMAD4-201ENST00000342988 ARL17AQ8IVW1 177 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 SLC5A2P31639 672 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 NAT8Q9UHE5 227 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 TNFRSF10CO14798 259 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 CHST6Q9GZX3 395 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 IGSF5Q9NSI5 407 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 K7EQS6 105 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 ZNF737O75373 536 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 ALDOCP09972 364 aaKnown RBP16.03■□□□□ 0.16
SMAD4-201ENST00000342988 SLC35E2P0CK97 266 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 FOXK2Q01167 660 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 IL24Q13007 206 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 BTLAQ7Z6A9 289 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 BAP18Q8IXM2 172 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 TCEAL8Q8IYN2 117 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 PCYT2Q99447 389 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 DOCK5Q9H7D0 1870 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 OR52N4Q8NGI2 321 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 DYNLRB2Q8TF09 96 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 NEURL3Q96EH8 262 aa16.03■□□□□ 0.16
SMAD4-201ENST00000342988 RPS4Y1P22090 263 aaKnown RBP16.03■□□□□ 0.16
SMAD4-201ENST00000342988 RCL1Q9Y2P8 373 aaKnown RBP16.03■□□□□ 0.16
SMAD4-201ENST00000342988 SDHAP31040 664 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 PKIAP61925 76 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 FCRL6Q6DN72 434 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 POM121Q96HA1 1249 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 SIRPB1O00241 398 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 CEACAM3P40198 252 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 PRLHRP49683 370 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 PRTGQ2VWP7 1150 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 NTNG2Q96CW9 530 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 PSMG3Q9BT73 122 aaPredicted RBP16.02■□□□□ 0.16
SMAD4-201ENST00000342988 PGPEP1Q9NXJ5 209 aa16.02■□□□□ 0.16
SMAD4-201ENST00000342988 ARNTLO00327 626 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 ZNF865P0CJ78 1059 aaPredicted RBP16.02■□□□□ 0.15
SMAD4-201ENST00000342988 D2HGDHQ8N465 521 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 RAB40CQ96S21 281 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 B4DEV8 164 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 CCSO14618 274 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 PVRP15151 417 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 OR2A2Q6IF42 318 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 FBXL14Q8N1E6 418 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 PLSCR3Q9NRY6 295 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 MDH2P40926 338 aaKnown RBP16.02■□□□□ 0.15
SMAD4-201ENST00000342988 NHSL2Q5HYW2 709 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 FAM169BQ8N8A8 192 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 TMEM167BQ9NRX6 74 aa16.02■□□□□ 0.15
SMAD4-201ENST00000342988 RAXQ9Y2V3 346 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms