RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 KLHL24Q6TFL4 600 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 POC1AQ8NBT0 407 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 OR5D18Q8NGL1 313 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 C11orf40Q8WZ69 217 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 C2orf50Q96LR7 162 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 GPR27Q9NS67 375 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 CACFD1Q9UGQ2 172 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 SPAG17Q6Q759 2223 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 C5orf52A6NGY3 159 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 HIST1H1DP16402 221 aaKnown RBP19.8■□□□□ 0.76
TRIM28-202ENST00000341753 ZNF20P17024 532 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 TBPP20226 339 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 BTNL8Q6UX41 500 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 RNF133Q8WVZ7 376 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 ASB10Q8WXI3 467 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 IP6K3Q96PC2 410 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 ZNF304Q9HCX3 659 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 CPAMD8Q8IZJ3 1885 aa19.8■□□□□ 0.76
TRIM28-202ENST00000341753 TMEM150CB9EJG8 249 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 HKR1P10072 659 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 ADH6P28332 368 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 CAPZBP47756 277 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 MMP16P51512 607 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 P2RY4P51582 365 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 FOXK1P85037 733 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 HGFACQ04756 655 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 FABP9Q0Z7S8 132 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 OR10S1Q8NGN2 331 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 CABIN1Q9Y6J0 2220 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 WDFY3Q8IZQ1 3526 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 TRBV23-1A0A0A0MS06 115 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 ALG1L2C9J202 215 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 CRTAPO75718 401 aaPredicted RBP19.79■□□□□ 0.76
TRIM28-202ENST00000341753 IGKV3-11P04433 115 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 LYL1P12980 280 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 TSTD1Q8NFU3 115 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 OR6S1Q8NH40 331 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 ADAMTS18Q8TE60 1221 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 DUSP15Q9H1R2 295 aaPredicted RBP19.79■□□□□ 0.76
TRIM28-202ENST00000341753 RNF122Q9H9V4 155 aa19.79■□□□□ 0.76
TRIM28-202ENST00000341753 FRYLO94915 3013 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 BLACEA4D250 179 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 PMS2P1A4D2B8 440 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 SHISA8B8ZZ34 492 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 FAM157AC9JC47 383 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 TXNL1O43396 289 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 CDC14BO60729 498 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 SPEM2Q0P670 501 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 FAM71F1Q96KD3 344 aaPredicted RBP19.78■□□□□ 0.76
TRIM28-202ENST00000341753 IGHV1OR15-9A0A0B4J2B8 117 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 hCG_1809904A0A1W2PP81 198 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 A0A1W2PPH5 198 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 A0A1W2PR64 198 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 A0A1W2PRV1 198 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 OR3A2P47893 321 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 DHPSP49366 369 aaPredicted RBP19.78■□□□□ 0.76
TRIM28-202ENST00000341753 BLKP51451 505 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 AADACL3Q5VUY0 350 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 LCN10Q6JVE6 187 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 LINC00469Q8N7U9 141 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 OR10H5Q8NGA6 315 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 TCTN2Q96GX1 697 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 MTCH2Q9Y6C9 303 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 UNC13CQ8NB66 2214 aa19.78■□□□□ 0.76
TRIM28-202ENST00000341753 PHF3Q92576 2039 aaKnown RBP19.77■□□□□ 0.76
TRIM28-202ENST00000341753 TSPAN2O60636 221 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 IGHMP01871 453 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.77■□□□□ 0.76
TRIM28-202ENST00000341753 ABHD12BQ7Z5M8 362 aaPredicted RBP19.77■□□□□ 0.76
TRIM28-202ENST00000341753 NPRL2Q8WTW4 380 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 TMEM59Q9BXS4 323 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 LMAN1LQ9HAT1 526 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 EHFQ9NZC4 300 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 FBXL17Q9UF56 701 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 MED19A0JLT2 244 aaPredicted RBP19.77■□□□□ 0.76
TRIM28-202ENST00000341753 MFNGO00587 321 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 OPN1LWP04000 364 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 HCKP08631 526 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 FPR2P25090 351 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 SULT1A2P50226 295 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 CSNK2A1P68400 391 aaPredicted RBP19.77■□□□□ 0.76
TRIM28-202ENST00000341753 AWAT1Q58HT5 328 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 VAX1Q5SQQ9 334 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 GRINAQ7Z429 371 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 ARRDC1Q8N5I2 433 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 C15orf54Q8N8G6 183 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 CSNK2A3Q8NEV1 391 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 TCEAL3Q969E4 200 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 GPER1Q99527 375 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 GHRLQ9UBU3 117 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 AMDHD2Q9Y303 409 aa19.77■□□□□ 0.76
TRIM28-202ENST00000341753 M0R036 132 aa19.76■□□□□ 0.75
TRIM28-202ENST00000341753 NME2P1O60361 137 aa19.76■□□□□ 0.75
TRIM28-202ENST00000341753 SMIM6P0DI80 62 aa19.76■□□□□ 0.75
TRIM28-202ENST00000341753 FOLR2P14207 255 aa19.76■□□□□ 0.75
TRIM28-202ENST00000341753 ZNF14P17017 642 aaPredicted RBP19.76■□□□□ 0.75
TRIM28-202ENST00000341753 ZNF708P17019 499 aa19.76■□□□□ 0.75
TRIM28-202ENST00000341753 PPP1R3BQ86XI6 285 aa19.76■□□□□ 0.75
TRIM28-202ENST00000341753 C1orf147Q96MC9 270 aaPredicted RBP19.76■□□□□ 0.75
TRIM28-202ENST00000341753 C5orf34Q96MH7 638 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms