RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 C1QTNF2Q9BXJ5 285 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 COMMD4Q9H0A8 199 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 ZCCHC3Q9NUD5 404 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 SIDT1Q9NXL6 827 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 DNAH14Q0VDD8 3507 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 CCDC163A0A0D9SF12 145 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 RBFOX3A6NFN3 312 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 K7ERQ8 282 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 GALR2O43603 387 aaPredicted RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 SERPINA4P29622 427 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 RPS24P62847 133 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 NHLH1Q02575 133 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 PLXDC2Q6UX71 529 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 SPRED2Q7Z698 418 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 SELENOHQ8IZQ5 122 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 ZNF709Q8N972 641 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 OR5L1Q8NGL2 311 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 TMEM106AQ96A25 262 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 FAM3DQ96BQ1 224 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 SLCO5A1Q9H2Y9 848 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 ZNF552Q9H707 407 aaPredicted RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 SLC2A9Q9NRM0 540 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 INPP5EQ9NRR6 644 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 CKLFQ9UBR5 152 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 CGGBP1Q9UFW8 167 aaPredicted RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 APOBEC3BQ9UH17 382 aaKnown RBP8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 CLDN16Q9Y5I7 305 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 SCN2AQ99250 2005 aa8.59□□□□□ -1.03
PTCHD4-201ENST00000339488 CENPVL1A0A0U1RR11 272 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 A0A1W2PR48 441 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 NDUFS8O00217 210 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 XRCC2O43543 280 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 SRPX2O60687 465 aaPredicted RBP8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 SAP30O75446 220 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 SLCO2B1O94956 709 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 IFNA6P05013 189 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 ZNF708P17019 499 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 SLC2A5P22732 501 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 PMPCAQ10713 525 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 ELOA3BQ3SY89 546 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 AGTRAPQ6RW13 159 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 NOXO1Q8NFA2 376 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 SLC26A10Q8NG04 563 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 ELOA3Q8NG57 546 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 OR5T1Q8NG75 326 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 C15orf40Q8WUR7 153 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 NRTNQ99748 197 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 MEGF9Q9H1U4 602 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 CMC2Q9NRP2 79 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 CUTCQ9NTM9 273 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 OR6C3Q9NZP0 311 aa8.59□□□□□ -1.04
PTCHD4-201ENST00000339488 A0A087WWC5 75 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 BLACEA4D250 179 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 ZNF891A8MT65 544 aaPredicted RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 HBP1O60381 514 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 OPN1LWP04000 364 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 CSRP1P21291 193 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 NKX2-1P43699 371 aaPredicted RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 FOXF1Q12946 379 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 SLC25A26Q70HW3 274 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 OR2L13Q8N349 312 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 GRHL3Q8TE85 626 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 ORAOV1Q8WV07 137 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 TMEM239Q8WW34 195 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 DNASE2BQ8WZ79 361 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 MCHR2Q969V1 340 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 ZNF701Q9NV72 531 aaPredicted RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 LRFN1Q9P244 771 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 VAX2Q9UIW0 290 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 ICKQ9UPZ9 632 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 WSB1Q9Y6I7 421 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 HEATR5BQ9P2D3 2071 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 AHRRA9YTQ3 701 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 H0YIV9 168 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 EIF1AYO14602 144 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 MELTFP08582 738 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 AK4P27144 223 aaPredicted RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 PNPLA4P41247 253 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 EIF1AXP47813 144 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 CX3CR1P49238 355 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 VAMP3Q15836 100 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 DCAF4L1Q3SXM0 396 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 CLEC18BQ6UXF7 455 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 DPPA3Q6W0C5 159 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 TMEM184AQ6ZMB5 413 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 NPEPL1Q8NDH3 523 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 OR5D18Q8NGL1 313 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 C2orf15Q8WU43 125 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 TMEM40Q8WWA1 233 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 SLC5A6Q9Y289 635 aa8.58□□□□□ -1.04
PTCHD4-201ENST00000339488 ODAMA1E959 279 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 OR2AG2A6NM03 316 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 H3BRB1 525 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 DBHP09172 617 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 ARR3P36575 388 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 CCR5P51681 352 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 CLDN17P56750 224 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 RAB11AP62491 216 aa8.57□□□□□ -1.04
PTCHD4-201ENST00000339488 TRAPPC6BQ86SZ2 158 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms