RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DCXRQ7Z4W1 244 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 OR51L1Q8NGJ5 315 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 OR2T4Q8NH00 348 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 OR8S1Q8NH09 359 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
LINC01116-202ENST00000339037 SEMA6AQ9H2E6 1030 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 C16orf95Q9H693 158 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 IL20Q9NYY1 176 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 ZNRD1Q9P1U0 126 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 N6AMT1Q9Y5N5 214 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 COMMD3-BMI1R4GMX3 469 aa12.86□□□□□ -0.35
LINC01116-202ENST00000339037 A0A1B0GW55 424 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 ANKRD30BLA7E2S9 258 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 B2RBV5 119 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 XRCC2O43543 280 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 MUC1P15941 1255 aaPredicted RBP12.85□□□□□ -0.35
LINC01116-202ENST00000339037 EEF1B2P24534 225 aaKnown RBP12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DDOSTP39656 456 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 TAF13Q15543 124 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 WDR38Q5JTN6 314 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 LCN8Q6JVE9 175 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4L9Q6RFH8 374 aaPredicted RBP12.85□□□□□ -0.35
LINC01116-202ENST00000339037 METAP1DQ6UB28 335 aaPredicted RBP12.85□□□□□ -0.35
LINC01116-202ENST00000339037 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 FGFRL1Q8N441 504 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 FAM216BQ8N7L0 139 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 OR9Q1Q8NGQ5 310 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 NPRL2Q8WTW4 380 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 LRRC29Q8WV35 223 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 CCL13Q99616 98 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 RNPEPL1Q9HAU8 725 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 SIRT7Q9NRC8 400 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 TBC1D23Q9NUY8 699 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 DUX4Q9UBX2 424 aa12.85□□□□□ -0.35
LINC01116-202ENST00000339037 CCNB2O95067 398 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 SOX14O95416 240 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 GYPBP06028 91 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 SPARCP09486 303 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 MNAT1P51948 309 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 MS4A2Q01362 244 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 RASSF6Q6ZTQ3 369 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 LINC00471Q8N535 108 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 SLC37A3Q8NCC5 494 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 LY6G5BQ8NDX9 201 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 OR4Q3Q8NH05 313 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 SPSB4Q96A44 273 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 SLAMF6Q96DU3 332 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 KCNJ15Q99712 375 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 MAGIXQ9H6Y5 334 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 BRD7Q9NPI1 651 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 CENPMQ9NSP4 180 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 U3KQV3 271 aa12.84□□□□□ -0.35
LINC01116-202ENST00000339037 ZNF816-ZNF321PA0A0X1KG74 233 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 ZNF878C9JN71 531 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.83□□□□□ -0.36
LINC01116-202ENST00000339037 TIPRLO75663 272 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 TSPAN9O75954 239 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 PAHP00439 452 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 TGFBR2P37173 567 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 ENTPD1P49961 510 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 CSNK2BP67870 215 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
LINC01116-202ENST00000339037 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
LINC01116-202ENST00000339037 EGR3Q06889 387 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 IKZF1Q13422 519 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 CRMP1Q14194 572 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 TIGD6Q17RP2 521 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 WDR82Q6UXN9 313 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 SLC16A9Q7RTY1 509 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 DPY19L4Q7Z388 723 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 DHFR2Q86XF0 187 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 C11orf53Q8IXP5 236 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 OR1M1Q8NGA1 313 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 C12orf43Q96C57 262 aaKnown RBP12.83□□□□□ -0.36
LINC01116-202ENST00000339037 NSL1Q96IY1 281 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 TSSK6Q9BXA6 273 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 MUC13Q9H3R2 512 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 ARMC1Q9NVT9 282 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 DNAJB11Q9UBS4 358 aa12.83□□□□□ -0.36
LINC01116-202ENST00000339037 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 ANKRD61A6NGH8 418 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 ACOT8O14734 319 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 NPFFO15130 113 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 TBX1O43435 398 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 NDUFB3O43676 98 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 RPLP1P05386 114 aaKnown RBP12.82□□□□□ -0.36
LINC01116-202ENST00000339037 CSF1P09603 554 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 CLUP10909 449 aa12.82□□□□□ -0.36
LINC01116-202ENST00000339037 FMO3P31513 532 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms