RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SPICQ8N5J4 248 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 OR10P1Q8NGE3 313 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 HGDQ93099 445 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 ZFC3H1O60293 1989 aaKnown RBP12.34□□□□□ -0.43
RTN4-202ENST00000337526 GLULP15104 373 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 SCAND1P57086 179 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 FBXL14Q8N1E6 418 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 ZNF485Q8NCK3 441 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 NOXO1Q8NFA2 376 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 MOGAT1Q96PD6 335 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 SVILO95425 2214 aa12.33□□□□□ -0.43
RTN4-202ENST00000337526 SPRY1O43609 319 aaPredicted RBP12.33□□□□□ -0.44
RTN4-202ENST00000337526 PPP1R1AQ13522 171 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 CEACAM16Q2WEN9 425 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 SP6Q3SY56 376 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 IL34Q6ZMJ4 242 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 ZNF705AQ6ZN79 300 aaPredicted RBP12.33□□□□□ -0.44
RTN4-202ENST00000337526 ZNF561Q8N587 486 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 OR1J1Q8NGS3 322 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 PTP4A1Q93096 173 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 RPUSD4Q96CM3 377 aaKnown RBP12.33□□□□□ -0.44
RTN4-202ENST00000337526 CABLES2Q9BTV7 478 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 RIMS4Q9H426 269 aaPredicted RBP12.33□□□□□ -0.44
RTN4-202ENST00000337526 TMEM272A0A1B0GTI8 110 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 S100A8P05109 93 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 THBS4P35443 961 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 ARR3P36575 388 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 NPBWR1P48145 328 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 GZMMP51124 257 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
RTN4-202ENST00000337526 BSCL2Q96G97 398 aaPredicted RBP12.33□□□□□ -0.44
RTN4-202ENST00000337526 C12orf57Q99622 126 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 UQCC2Q9BRT2 126 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 H3BP45 60 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 TNFSF11O14788 317 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 PLA2G10O15496 165 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 ZP3P21754 424 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 IFITM3Q01628 133 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 C9orf50Q5SZB4 431 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 NHLRC1Q6VVB1 395 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 PRRX2Q99811 253 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 VN1R1Q9GZP7 353 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 IGHV5-51A0A0C4DH38 117 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 ZNF816-ZNF321PA0A0X1KG74 233 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 CST7O76096 145 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 WNT11O96014 354 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 IAPPP10997 89 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 GABRA4P48169 554 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 IRF3Q14653 427 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 SLC10A1Q14973 349 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 ZDHHC23Q8IYP9 409 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 KCNE4Q8WWG9 221 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
RTN4-202ENST00000337526 ARHGAP5-AS1Q96IT6 56 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 TSPAN32Q96QS1 320 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 DEFB127Q9H1M4 99 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 NDRG3Q9UGV2 375 aa12.33□□□□□ -0.44
RTN4-202ENST00000337526 ALG1L2C9J202 215 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 RER1O15258 196 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 CLN5O75503 358 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 GP1BAP07359 652 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 CTLA4P16410 223 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 GPR3P46089 330 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
RTN4-202ENST00000337526 KISS1Q15726 138 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 ZNF141Q15928 474 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 PWWP2BQ6NUJ5 590 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 OR2W3Q7Z3T1 314 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 ZNF321PQ8N8H1 164 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 ROBO4Q8WZ75 1007 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 C20orf202A1L168 122 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
RTN4-202ENST00000337526 UBE3DQ7Z6J8 389 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 AKR1E2Q96JD6 320 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 OPA3Q9H6K4 179 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 FAM60AQ9NP50 221 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 RNASEK-C17orf49H0YIS7 233 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 NTN1O95631 604 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 NME1P15531 152 aaKnown RBP12.32□□□□□ -0.44
RTN4-202ENST00000337526 FUT3P21217 361 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 RFC3P40938 356 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 AKR1C3P42330 323 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 FUT6P51993 359 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 EIF4EBP2Q13542 120 aaPredicted RBP12.32□□□□□ -0.44
RTN4-202ENST00000337526 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 MRM1Q6IN84 353 aaKnown RBP12.32□□□□□ -0.44
RTN4-202ENST00000337526 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 OR52N4Q8NGI2 321 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 OR4F5Q8NH21 305 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 SPSB1Q96BD6 273 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 SMIM7Q9BQ49 75 aa12.32□□□□□ -0.44
RTN4-202ENST00000337526 IGHA1P01876 353 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 HIST1H1DP16402 221 aaKnown RBP12.31□□□□□ -0.44
RTN4-202ENST00000337526 CXCL3P19876 107 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 FPR2P25090 351 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms