RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 A0A1B0GWA3 101 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 M0QZ24 198 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PIAS2O75928 621 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 GALP22466 123 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SUCLG1P53597 346 aaKnown RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 OR8G1Q15617 311 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SMUG1Q53HV7 270 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CMTM4Q8IZR5 234 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM229BQ8NBD8 167 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SLC46A2Q9BY10 475 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 SFXN1Q9H9B4 322 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PLSCR3Q9NRY6 295 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 UQCR10Q9UDW1 63 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 AMDHD2Q9Y303 409 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CHST2Q9Y4C5 530 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF840PA6NDX5 716 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 RBFOX3A6NFN3 312 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 FAM3AP98173 230 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 FAM109BQ6ICB4 259 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 MRM1Q6IN84 353 aaKnown RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 OR4B1Q8NGF8 309 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ATOH1Q92858 354 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 TNFRSF13CQ96RJ3 184 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ATOH8Q96SQ7 321 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 UQCC1Q9NVA1 299 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 MARCH5Q9NX47 278 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 OBP2AQ9NY56 170 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ITGB4P16144 1822 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 A0A1W2PN81 502 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 OR2T8A6NH00 312 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF716A6NP11 495 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 XRCC2O43543 280 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 COX6CP09669 75 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CHRNA7P36544 502 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 CD96P40200 585 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF468Q5VIY5 522 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 FAM24BQ8N5W8 94 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF583Q96ND8 569 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 LRRC3BQ96PB8 259 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 MRPL37Q9BZE1 423 aaKnown RBP5.62□□□□□ -1.51
CSMD1-201ENST00000335551 PKIBQ9C010 78 aa5.62□□□□□ -1.51
CSMD1-201ENST00000335551 DIRC3C9JPN6 131 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF217O75362 1048 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 UTS2O95399 124 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 NDUFB7P17568 137 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 EPHA2P29317 976 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 SULT1A1P50225 295 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 METAP1P53582 386 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 LMO3Q8TAP4 145 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 PECRQ9BY49 303 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 BANF2Q9H503 90 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TSPAN13O95857 204 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 GCGP01275 180 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 BRS3P32247 399 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 C17orf67Q0P5P2 114 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 OR4F17Q8NGA8 305 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 VCX2Q9H322 139 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 DOK5Q9P104 306 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TNCP24821 2201 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 GPR37O15354 613 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 PTGFRP43088 359 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 FAM3BP58499 235 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 BVESQ8NE79 360 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TSACCQ96A04 125 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TEX101Q9BY14 249 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 FPR2P25090 351 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF789Q5FWF6 425 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 FAM78BQ5VT40 261 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 C1orf140Q5VVS0 124 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 NSUN5P2Q63ZY6 315 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 TEAD3Q99594 435 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 PRRX2Q99811 253 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 MAGT1Q9H0U3 335 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 SLC5A6Q9Y289 635 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 GPX5O75715 221 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CD68P34810 354 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 DPPA3Q6W0C5 159 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 GRASPQ7Z6J2 395 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CPEB1Q9BZB8 566 aaKnown RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 IGSF23A1L1A6 192 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 GFRA2O00451 464 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 HNRNPA1P09651 372 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 DCTDP32321 178 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 ID4P47928 161 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 HLA-DRB3P79483 266 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 FAHD2BQ6P2I3 314 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CLEC14AQ86T13 490 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 FAHD2AQ96GK7 314 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 NIPSNAP1Q9BPW8 284 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 PIPOXQ9P0Z9 390 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 WRAP73Q9P2S5 460 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 MRPS16Q9Y3D3 137 aaKnown RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 SPG11Q96JI7 2443 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 PGGT1BP53609 377 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 HLA-DRB5Q30154 266 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 MARCH1Q8TCQ1 289 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 SEBOXQ9HB31 216 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-201ENST00000335551 CLDND1Q9NY35 253 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 UFC1Q9Y3C8 167 aa5.61□□□□□ -1.51
CSMD1-201ENST00000335551 ARFGEF1Q9Y6D6 1849 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms