RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TMEM52Q8NDY8 209 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 DNAAF1Q8NEP3 725 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 STAG3L4Q8TBR4 150 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TM4SF18Q96CE8 201 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 TLCD1Q96CP7 247 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 ELP4Q96EB1 424 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GAL3ST1Q99999 423 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NRIP2Q9BQI9 281 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NIPAL2Q9H841 368 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SAP30LQ9HAJ7 183 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 NOX3Q9HBY0 568 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 GIMAP4Q9NUV9 329 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 SLC23A1Q9UHI7 598 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 PFDN2Q9UHV9 154 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 KCNK7Q9Y2U2 307 aa1.13□□□□□ -2.23
LINC00643-201ENST00000334389 IGLV1-50A0A075B6I6 118 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 LYRM9A8MSI8 78 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 BBIP1A8MTZ0 92 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 C12orf71A8MTZ7 269 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 NPIPB11E5RHQ5 1161 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PRR23D1E9PI22 279 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 J3KTA2 159 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 K7EPI3 171 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 AZIN1O14977 448 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CHST1O43916 411 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 EFNA2O43921 213 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MRPS14O60783 128 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SNNO75324 88 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SERPINB7O75635 380 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GUCA1CO95843 209 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SYF2O95926 243 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MOCS2O96007 188 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CYB5AP00167 134 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 IFNGP01579 166 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 AMY1AP04745 511 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 AMY2AP04746 511 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 DBIP07108 87 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 FAM106CPP0CH98 169 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 DNAH10OSP0CZ25 163 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PRR23D2P0DMB1 279 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 STMN1P16949 149 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 IL12BP29460 328 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GKP32189 559 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 DAP3P51398 398 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GTF2A1P52655 376 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 RIDAP52758 137 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CRISP3P54108 245 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GPX6P59796 221 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 UBE2NP61088 152 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MRPS35P82673 323 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 RPL19P84098 196 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GUCY1A3Q02108 690 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PPP1R7Q15435 360 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CHI3L2Q15782 390 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ASB16-AS1Q495Z4 193 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 LCE1AQ5T7P2 110 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 Q6P435 159 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 Q6ZSN1 163 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 RFLNAQ6ZTI6 216 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PRSS41Q7RTY9 318 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 OVCH2Q7RTZ1 564 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SLC36A1Q7Z2H8 476 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 HSD17B13Q7Z5P4 300 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ADCK1Q86TW2 530 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CROCCP3Q8IVE0 287 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 FOXRED2Q8IWF2 684 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PDIK1LQ8N165 341 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 OR52K1Q8NGK4 314 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 OR5M9Q8NGP3 310 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 OR4A5Q8NH83 315 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PTX4Q96A99 478 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 APOBEC3DQ96AK3 386 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 NRBF2Q96F24 287 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 C7orf26Q96N11 449 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 OR2A7Q96R45 310 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MBOAT4Q96T53 435 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CABLES2Q9BTV7 478 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 JAM3Q9BX67 310 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 NXF5Q9H1B4 397 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 OR51B5Q9H339 312 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MMADHCQ9H3L0 296 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM38AQ9H6F2 299 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ARMC7Q9H6L4 198 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 NANOGQ9H9S0 305 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 DIABLOQ9NR28 239 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PTTG2Q9NZH5 202 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ERVK-19Q9WJR5 959 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 VWA7Q9Y334 891 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 COX11Q9Y6N1 276 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 LRBAP50851 2863 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GTF3C1Q12789 2109 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SMIM31A0A1B0GVY4 71 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 LRP5LA4QPB2 252 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 RFPL4AA6NLU0 287 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF729A6NN14 1252 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 RFPL4AL1F8VTS6 287 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 BLOC1S5-TXNDC5H3BN57 136 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CCL24O00175 119 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 EREGO14944 169 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms