RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ZNF814B7Z6K7 855 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 IGLV3-1P01715 115 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 GIMD1P0DJR0 217 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 PRF1P14222 555 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 CTSSP25774 331 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 CDAP32320 146 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 DCDP81605 110 aaKnown RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 SCRN3Q0VDG4 424 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 SMAD4Q13485 552 aaKnown RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 MST1LQ2TV78 715 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 HFEQ30201 348 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ANKRD55Q3KP44 614 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 NKAPLQ5M9Q1 402 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 AADACL3Q5VUY0 350 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 Q7L0L9 218 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 DOK3Q7L591 496 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 RABEPKQ7Z6M1 372 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 BOLLQ8N9W6 283 aaKnown RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 BHLHE23Q8NDY6 225 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 OR4A4PQ8NGN8 299 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 OR14K1Q8NGZ2 314 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 TMED6Q8WW62 240 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ZNF775Q96BV0 537 aaPredicted RBP7.68□□□□□ -1.18
CLK1-201ENST00000321356 CYYR1Q96J86 154 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 SCGB3A2Q96PL1 93 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 BANF2Q9H503 90 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 SEC61A2Q9H9S3 476 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 LMAN1LQ9HAT1 526 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 MMP26Q9NRE1 261 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 SDHAF3Q9NRP4 125 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 OR5AC2Q9NZP5 309 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 KLRF1Q9NZS2 232 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 PPP4R1LQ9P1A2 415 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 ASH2LQ9UBL3 628 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 DNAJB11Q9UBS4 358 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 POLR1DQ9Y2S0 133 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 WIF1Q9Y5W5 379 aa7.68□□□□□ -1.18
CLK1-201ENST00000321356 RER1O15258 196 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 ADAP1O75689 374 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 SLC2A1P11166 492 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 NAT2P11245 290 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 AIMP2Q13155 320 aaKnown RBP7.67□□□□□ -1.18
CLK1-201ENST00000321356 PLEKHN1Q494U1 663 aaPredicted RBP7.67□□□□□ -1.18
CLK1-201ENST00000321356 NKAIN1Q4KMZ8 207 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 TMEM71Q6P5X7 295 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 IL34Q6ZMJ4 242 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 LDLRAD3Q86YD5 345 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 ABCA7Q8IZY2 2146 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 LINC00518Q8N0U6 118 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 SLC25A45Q8N413 288 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 POC1AQ8NBT0 407 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 SLC38A9Q8NBW4 561 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 OR5H2Q8NGV7 314 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 PAQR8Q8TEZ7 354 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 FAM71F1Q96KD3 344 aaPredicted RBP7.67□□□□□ -1.18
CLK1-201ENST00000321356 OXGR1Q96P68 337 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 URM1Q9BTM9 101 aaKnown RBP7.67□□□□□ -1.18
CLK1-201ENST00000321356 OR10A2Q9H208 303 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 SLC26A1Q9H2B4 701 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 HPF1Q9NWY4 346 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 GHRLQ9UBU3 117 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 LPAR3Q9UBY5 353 aa7.67□□□□□ -1.18
CLK1-201ENST00000321356 ZNF629Q9UEG4 869 aaPredicted RBP7.67□□□□□ -1.18
CLK1-201ENST00000321356 NCOA6Q14686 2063 aaPredicted RBP7.67□□□□□ -1.18
CLK1-201ENST00000321356 FIGNL2A6NMB9 653 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 E9PLN8 166 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 CRTAPO75718 401 aaPredicted RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 DKK1O94907 266 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 CSTBP04080 98 aaKnown RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 HEXBP07686 556 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 HCKP08631 526 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SRFP11831 508 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 MYF5P13349 255 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 AMY2BP19961 511 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 ZNF84P51523 738 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 AKR1C2P52895 323 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 TAS2R46P59540 309 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 GRB2P62993 217 aaKnown RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 SRSF3P84103 164 aaKnown RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 AKR1C1Q04828 323 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 ECH1Q13011 328 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SLC9A3R2Q15599 337 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 DHRS7BQ6IAN0 325 aaPredicted RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 Q6ZSR3 168 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 COMMD2Q86X83 199 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 OR2M3Q8NG83 312 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 OR10G3Q8NGC4 313 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 ADAMTS17Q8TE56 1095 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SAT2Q96F10 170 aaPredicted RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 SMIM8Q96KF7 97 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 OR10C1Q96KK4 312 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 C2orf50Q96LR7 162 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 SLC5A7Q9GZV3 580 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 ZNF175Q9Y473 711 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 CABIN1Q9Y6J0 2220 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 A0A1W2PNR3 127 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 PMS2P1A4D2B8 440 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 TOX3O15405 576 aaPredicted RBP7.66□□□□□ -1.18
CLK1-201ENST00000321356 RAMP1O60894 148 aa7.66□□□□□ -1.18
CLK1-201ENST00000321356 CA11O75493 328 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms