RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 NOX3Q9HBY0 568 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 KDM4BO94953 1096 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 COX5AP20674 150 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 IGHV1-2P23083 117 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 PRSS3P35030 304 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 BTCP35070 178 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 SRP9P49458 86 aaKnown RBP15.47■□□□□ 0.07
RAB39A-201ENST00000320578 BTG1P62324 171 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF92Q03936 586 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 SNTB2Q13425 540 aaKnown RBP15.47■□□□□ 0.07
RAB39A-201ENST00000320578 UNC119Q13432 240 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 CRIP3Q6Q6R5 217 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 GLIPR1L1Q6UWM5 242 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 SNRNP27Q8WVK2 155 aaKnown RBP15.47■□□□□ 0.07
RAB39A-201ENST00000320578 REPIN1Q9BWE0 567 aaKnown RBP15.47■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF107Q9UII5 783 aaPredicted RBP15.47■□□□□ 0.07
RAB39A-201ENST00000320578 FREM1Q5H8C1 2179 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 RAB27BO00194 218 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 GMDSO60547 372 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 RBBP9O75884 186 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 APLNRP35414 380 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 PTGFRP43088 359 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 MALLQ13021 153 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 HIKESHIQ53FT3 197 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 OLFML2AQ68BL7 652 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF585AQ6P3V2 769 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 FAM180AQ6UWF9 173 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF584Q8IVC4 421 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 GCNT2Q8N0V5 402 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 GPX8Q8TED1 209 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 GPER1Q99527 375 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 NKX3-1Q99801 234 aaPredicted RBP15.47■□□□□ 0.07
RAB39A-201ENST00000320578 DPAGT1Q9H3H5 408 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 NLKQ9UBE8 527 aa15.47■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF816-ZNF321PA0A0X1KG74 233 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 MEIOCA2RUB1 952 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 C5orf49A4QMS7 147 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 MELTFP08582 738 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 TRAPPC2P0DI81 140 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 TRAPPC2BP0DI82 140 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 TMPRSS3P57727 454 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 GABRA6Q16445 453 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 PIGTQ969N2 578 aa15.46■□□□□ 0.07
RAB39A-201ENST00000320578 ARHGAP21Q5T5U3 1957 aa15.46■□□□□ 0.06
RAB39A-201ENST00000320578 FIGNL2A6NMB9 653 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 ICMTO60725 284 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 OR3A4PP47883 348 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 RAG2P55895 527 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 OR10K2Q6IF99 312 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 LHFPL2Q6ZUX7 228 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 ZNF101Q8IZC7 436 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 UBASH3BQ8TF42 649 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 AQP3Q92482 292 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 CST11Q9H112 138 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 KLK11Q9UBX7 282 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 TP53TG5Q9Y2B4 290 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 NUBP2Q9Y5Y2 271 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 AKAP13Q12802 2813 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 CACNA1GO43497 2377 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 DLL1O00548 723 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 TNFSF13O75888 250 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 NRASP01111 189 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 CGAP01215 116 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 LPLP06858 475 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 CSF1P09603 554 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 TIMP3P35625 211 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 UBE2NP61088 152 aaKnown RBP15.45■□□□□ 0.06
RAB39A-201ENST00000320578 RNASE12Q5GAN4 147 aaKnown RBP15.45■□□□□ 0.06
RAB39A-201ENST00000320578 MDP1Q86V88 176 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 MED12LQ86YW9 2145 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 GABRG1Q8N1C3 465 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 C17orf78Q8N4C9 275 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 CNEP1R1Q8N9A8 125 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 SPACA5Q96QH8 159 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 HRASLSQ9HDD0 168 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 KCNN3Q9UGI6 736 aa15.45■□□□□ 0.06
RAB39A-201ENST00000320578 CDC14BO60729 498 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 HNRNPCP07910 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
RAB39A-201ENST00000320578 HLA-DMAP28067 261 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 FUT6P51993 359 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 ACTBP60709 375 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 ACTG1P63261 375 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 P2RY6Q15077 328 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 ZNF260Q3ZCT1 412 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 C1orf185Q5T7R7 199 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 RTL6Q6ICC9 239 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 ASCL4Q6XD76 172 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 SEM1Q6ZVN7 128 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 RNF144BQ7Z419 303 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 CSNK2A3Q8NEV1 391 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 OR5L1Q8NGL2 311 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 FAM57AQ8TBR7 257 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 GCDHQ92947 438 aaPredicted RBP15.44■□□□□ 0.06
RAB39A-201ENST00000320578 UPRTQ96BW1 309 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 URM1Q9BTM9 101 aaKnown RBP15.44■□□□□ 0.06
RAB39A-201ENST00000320578 CACNG6Q9BXT2 260 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 LPAR5Q9H1C0 372 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 OBP2BQ9NPH6 170 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 GPR173Q9NS66 373 aa15.44■□□□□ 0.06
RAB39A-201ENST00000320578 PROCRQ9UNN8 238 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms