RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TMEM229BQ8NBD8 167 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC30A7Q8NEW0 376 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 OR52N5Q8NH56 324 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 IFI44Q8TCB0 444 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 RNF128Q8TEB7 428 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 ASB5Q8WWX0 329 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 KLHL13Q9P2N7 655 aa13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 MAP1BP46821 2468 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-201ENST00000319854 EP300Q09472 2414 aaPredicted RBP13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 IGHV3-15A0A0B4J1V0 119 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 C13orf42A0A1B0GVH6 325 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 LOC107986453A0A1B0GWG9 222 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 ANKUB1A6NFN9 424 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 MSGN1A6NI15 193 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 H2BFMP0C1H6 154 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 SFTA3P0C7M3 94 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 CRABP1P29762 137 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 AIMP2Q13155 320 aaKnown RBP13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC22A6Q4U2R8 563 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 ADAD2Q8NCV1 583 aaKnown RBP13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 OR10H5Q8NGA6 315 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 MCHR2Q969V1 340 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 RNF126Q9BV68 326 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 PAPOLGQ9BWT3 736 aaKnown RBP13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 CKLFQ9UBR5 152 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 KLK13Q9UKR3 277 aa13.77□□□□□ -0.2
SHROOM1-201ENST00000319854 C1orf196B1AJZ1 125 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 H0YIZ8 118 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 F10P00742 488 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 CD2P06729 351 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 TPT1P13693 172 aaKnown RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 ID4P47928 161 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 RSPO4Q2I0M5 234 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 OR4K17Q8NGC6 315 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 STOML3Q8TAV4 291 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 DCUN1D4Q92564 292 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 DDIT4LQ96D03 193 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 EGLN1Q9GZT9 426 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 PRMT8Q9NR22 394 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 C9orf170A2RU37 121 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 CLN5O75503 358 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 ZFAND5O76080 213 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 HTR3BO95264 441 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 ACTBP60709 375 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 ACTG1P63261 375 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 CXADRP78310 365 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 LPCAT3Q6P1A2 487 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 LYG2Q86SG7 212 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 ZSCAN4Q8NAM6 433 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 SLC26A10Q8NG04 563 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 ASB10Q8WXI3 467 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 ISOC2Q96AB3 205 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 CLDN23Q96B33 292 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 NECAB3Q96P71 396 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 GNRHR2Q96P88 292 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 MYOZ1Q9NP98 299 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 CHST11Q9NPF2 352 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 SERINC1Q9NRX5 453 aa13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 VSX1Q9NZR4 365 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 PTRH2Q9Y3E5 179 aaKnown RBP13.77□□□□□ -0.21
SHROOM1-201ENST00000319854 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 LOC100289279A0A1B0GTE1 492 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 S100PP25815 95 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 CLDN6P56747 220 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 IL13RA1P78552 427 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 ACBD4Q8NC06 268 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 C11orf40Q8WZ69 217 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 FGGYQ96C11 551 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 FOXRED1Q96CU9 486 aaPredicted RBP13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 DUSP23Q9BVJ7 150 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 OR52A1Q9UKL2 312 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 MRPS18BQ9Y676 258 aaKnown RBP13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 TMEM235A6NFC5 223 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 NQO2P16083 231 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 C9orf152Q5JTZ5 239 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 SOX7Q9BT81 388 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 OR2S2Q9NQN1 319 aa13.76□□□□□ -0.21
SHROOM1-201ENST00000319854 RNASEK-C17orf49H0YIS7 233 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 PHYHO14832 338 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 OR8U8P0C7N1 319 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 VAMP1P23763 118 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 CPT2P23786 658 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 TSC22D1Q15714 1073 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 SLC25A42Q86VD7 318 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 CARFQ8N187 725 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 GVQW1Q8N7I0 195 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 ASB17Q8WXJ9 295 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 TGIF2Q9GZN2 237 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 CHMP1AQ9HD42 196 aaPredicted RBP13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 SEMA5BQ9P283 1151 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 TEX13DA0A0J9YY54 714 aaPredicted RBP13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 C5orf51A6NDU8 294 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 CYB5AP00167 134 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 CRHP06850 196 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 PSMB6P28072 239 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 CLRN1P58418 232 aa13.75□□□□□ -0.21
SHROOM1-201ENST00000319854 OR5L2Q8NGL0 311 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms