RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MARVELD1Q9BSK0 173 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 C1QTNF5Q9BXJ0 243 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 ATG5Q9H1Y0 275 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 ETAA1Q9NY74 926 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 NPAP1Q9NZP6 1156 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 NLKQ9UBE8 527 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 RAB22AQ9UL26 194 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 SVILO95425 2214 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 A0A096LPE4 126 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 A0A1W2PPZ6 126 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 ZNF503-AS2A6NEH8 195 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 CENPXA8MT69 81 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 ECDO95905 644 aaPredicted RBP10.33□□□□□ -0.76
TRIM40-205ENST00000307859 HLA-HP01893 362 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 FAHP16930 419 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 ARR3P36575 388 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 UNC119Q13432 240 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 MTFR2Q6P444 385 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 TFAP2EQ6VUC0 442 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 OR2W3Q7Z3T1 314 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 GLCCI1Q86VQ1 547 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 PAQR4Q8N4S7 273 aaPredicted RBP10.33□□□□□ -0.76
TRIM40-205ENST00000307859 SEMA6DQ8NFY4 1073 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 OR2AE1Q8NHA4 323 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 WNT2BQ93097 391 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 SPSB4Q96A44 273 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 PHF21AQ96BD5 680 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 UPRTQ96BW1 309 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 C1orf147Q96MC9 270 aaPredicted RBP10.33□□□□□ -0.76
TRIM40-205ENST00000307859 TRIB1Q96RU8 372 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 NOX3Q9HBY0 568 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 PIGLQ9Y2B2 252 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 LRRK2Q5S007 2527 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 TRAV18A0A075B6X5 111 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 LOC100509620A0A075B734 347 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 A0A0B4J293 547 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 hCG_38984A0A1B0GV85 526 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 ANKRD20A5PA0PJZ0 165 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 MEIOCA2RUB1 952 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 TMEM14DPA8MWL7 114 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 BOLA2-SMG1P6H3BVE0 249 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 H7C417 338 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 XRCC2O43543 280 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 HCKP08631 526 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 PTHLHP12272 177 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 EDN3P14138 238 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 ACKR3P25106 362 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 AP3S2P59780 193 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 PMPCAQ10713 525 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 TNK1Q13470 666 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 UBE2V2Q15819 145 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 ACSF3Q4G176 576 aaPredicted RBP10.32□□□□□ -0.76
TRIM40-205ENST00000307859 AWAT2Q6E213 333 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 OR10K2Q6IF99 312 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 TMEM53Q6P2H8 277 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 CRIP3Q6Q6R5 217 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 RNF144BQ7Z419 303 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 BCL2L2Q92843 193 aaPredicted RBP10.32□□□□□ -0.76
TRIM40-205ENST00000307859 CREB3L1Q96BA8 519 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 KLK11Q9UBX7 282 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 MTFP1Q9UDX5 166 aa10.32□□□□□ -0.76
TRIM40-205ENST00000307859 MRPS28Q9Y2Q9 187 aaKnown RBP10.32□□□□□ -0.76
TRIM40-205ENST00000307859 AHRRA9YTQ3 701 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 K7EM74 188 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 ALDH3B1P43353 468 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 OR3A4PP47883 348 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 RIPPLY1Q0D2K3 151 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 OR8B8Q15620 311 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 LINC00303Q3SY05 128 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 OLFML2AQ68BL7 652 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 TMEM42Q69YG0 159 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 RAB12Q6IQ22 244 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 FAM214BQ7L5A3 538 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 ANGPTL5Q86XS5 388 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 DEDD2Q8WXF8 326 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 AKAP1Q92667 903 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRIM40-205ENST00000307859 SPACA5Q96QH8 159 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 NUDT16L1Q9BRJ7 211 aaKnown RBP10.31□□□□□ -0.76
TRIM40-205ENST00000307859 DPAGT1Q9H3H5 408 aa10.31□□□□□ -0.76
TRIM40-205ENST00000307859 DOPEY1Q5JWR5 2465 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 NAP1L6A6NFF2 107 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 MKRN2OSH3BPM6 223 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 RAB27BO00194 218 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 SULT1C2O00338 296 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 ZNHIT1O43257 154 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 SCGNO76038 276 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 CNOT4O95628 575 aaKnown RBP10.3□□□□□ -0.76
TRIM40-205ENST00000307859 GSTT2BP0CG30 244 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 UBBP0CG47 229 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 TRAPPC2P0DI81 140 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 TRAPPC2BP0DI82 140 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 STOMP27105 288 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 BTG1P62324 171 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 RAB1AP62820 205 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 FAM3AP98173 230 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 ZNF92Q03936 586 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 TLE1Q04724 770 aa10.3□□□□□ -0.76
TRIM40-205ENST00000307859 SSBP1Q04837 148 aaKnown RBP10.3□□□□□ -0.76
TRIM40-205ENST00000307859 CD300CQ08708 224 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms