RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 MED30Q96HR3 178 aa9.5□□□□□ -0.89
SMIM4-201ENST00000307106 PRRC1Q96M27 445 aa9.5□□□□□ -0.89
SMIM4-201ENST00000307106 TSSK2Q96PF2 358 aa9.5□□□□□ -0.89
SMIM4-201ENST00000307106 MCRIP2Q9BUT9 160 aaKnown RBP9.5□□□□□ -0.89
SMIM4-201ENST00000307106 TMEM109Q9BVC6 243 aa9.5□□□□□ -0.89
SMIM4-201ENST00000307106 PNRC2Q9NPJ4 139 aaKnown RBP9.5□□□□□ -0.89
SMIM4-201ENST00000307106 A4GNTQ9UNA3 340 aa9.5□□□□□ -0.89
SMIM4-201ENST00000307106 ANKRD30BLA7E2S9 258 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 DCTN6O00399 190 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 CDC42EP2O14613 210 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 COX7A1P24310 79 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 CRABP1P29762 137 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 IFNA8P32881 189 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 WDR4P57081 412 aaKnown RBP9.49□□□□□ -0.89
SMIM4-201ENST00000307106 ZBED5Q49AG3 693 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 GPR139Q6DWJ6 353 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 DNM1P34Q6PK57 102 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 MEPCEQ7L2J0 689 aaKnown RBP9.49□□□□□ -0.89
SMIM4-201ENST00000307106 ADCK1Q86TW2 530 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 OR4X2Q8NGF9 303 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 OR2AJ1Q8NGZ0 328 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 CGREF1Q99674 301 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 NDEL1Q9GZM8 345 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 WDR13Q9H1Z4 485 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 HEXA-AS1Q9H8Q6 139 aa9.49□□□□□ -0.89
SMIM4-201ENST00000307106 STARD9Q9P2P6 4700 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 FAM90A8PA6NJQ4 464 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 CDIPTO14735 213 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 SIGLEC5O15389 551 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 RAMP3O60896 148 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 TIPRLO75663 272 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 SLC18A1P54219 525 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 ETV3LQ6ZN32 361 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 SLC26A10Q8NG04 563 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 OR5K1Q8NHB7 308 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 ANGPTL6Q8NI99 470 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 SPTSSAQ969W0 71 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 RAB3IPQ96QF0 476 aaPredicted RBP9.48□□□□□ -0.89
SMIM4-201ENST00000307106 NRIP3Q9NQ35 241 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 RHCGQ9UBD6 479 aa9.48□□□□□ -0.89
SMIM4-201ENST00000307106 IGLV1-36A0A0B4J1U3 117 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 ACAA1P09110 424 aaPredicted RBP9.47□□□□□ -0.89
SMIM4-201ENST00000307106 CDKN2AP42771 156 aaKnown RBP9.47□□□□□ -0.89
SMIM4-201ENST00000307106 YAP1P46937 504 aaKnown RBP9.47□□□□□ -0.89
SMIM4-201ENST00000307106 GABRA2P47869 451 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 GZMMP51124 257 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 MXRA7P84157 204 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 IL5RAQ01344 420 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 TRAM2Q15035 370 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 TMPRSS11FQ6ZWK6 438 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 RNF113BQ8IZP6 322 aaKnown RBP9.47□□□□□ -0.89
SMIM4-201ENST00000307106 OFCC1Q8IZS5 231 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 OR6V1Q8N148 313 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 TMEM185AQ8NFB2 350 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 OR51D1Q8NGF3 324 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 LZICQ8WZA0 190 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 FOXRED1Q96CU9 486 aaPredicted RBP9.47□□□□□ -0.89
SMIM4-201ENST00000307106 ZNF649Q9BS31 505 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 TLNRD1Q9H1K6 362 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 OPA3Q9H6K4 179 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 SRA1Q9HD15 236 aaKnown RBP9.47□□□□□ -0.89
SMIM4-201ENST00000307106 C19orf12Q9NSK7 152 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 NKX1-2Q9UD57 310 aaPredicted RBP9.47□□□□□ -0.89
SMIM4-201ENST00000307106 CYB5R1Q9UHQ9 305 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 B9D1Q9UPM9 204 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 IER3IP1Q9Y5U9 82 aa9.47□□□□□ -0.89
SMIM4-201ENST00000307106 SORL1Q92673 2214 aa9.46□□□□□ -0.89
SMIM4-201ENST00000307106 A0A087WUU8 490 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 RHBDL1O75783 438 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 NDUFB2O95178 105 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 DDOSTP39656 456 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 THBS3P49746 956 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 NFYCQ13952 458 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 SSX2Q16385 188 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 SLC36A3Q495N2 470 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 C10orf99Q6UWK7 81 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 DRAM2Q6UX65 266 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 ZNF730Q6ZMV8 503 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 MBOAT2Q6ZWT7 520 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 C11orf42Q8N5U0 333 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 DPP10Q8N608 796 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 ZNRF1Q8ND25 227 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 OR10Z1Q8NGY1 313 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 MALSU1Q96EH3 234 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 TPD52L3Q96J77 140 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 RCHY1Q96PM5 261 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 PRR25Q96S07 402 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 GPX7Q96SL4 187 aaPredicted RBP9.46□□□□□ -0.9
SMIM4-201ENST00000307106 EBF4Q9BQW3 602 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 FNDC11Q9BVV2 318 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 TBL2Q9Y4P3 447 aaKnown RBP9.46□□□□□ -0.9
SMIM4-201ENST00000307106 N6AMT1Q9Y5N5 214 aa9.46□□□□□ -0.9
SMIM4-201ENST00000307106 hCG_1809904A0A1W2PP81 198 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 A0A1W2PPE2 198 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 A0A1W2PPH5 198 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 A0A1W2PR64 198 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 A0A1W2PRV1 198 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 OR2AT4A6NND4 320 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 J3KTA2 159 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 ANGPT2O15123 496 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms