RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MFAP5Q13361 173 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 OGFOD3Q6PK18 319 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 SLC22A18ASQ8N1D0 253 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 S100PBPQ96BU1 408 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 PNLIPP16233 465 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 GPR3P46089 330 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 NOVA1P51513 510 aaKnown RBP12.96□□□□□ -0.33
PTPN9-201ENST00000306726 AFF3P51826 1226 aaKnown RBP12.96□□□□□ -0.33
PTPN9-201ENST00000306726 TFAP2EQ6VUC0 442 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 C6orf201Q7Z4U5 140 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 C11orf40Q8WZ69 217 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 RNF222A6NCQ9 220 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 OR5K4A6NMS3 321 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 K7EPK0 472 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 GUSBP08236 651 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 PTGFRP43088 359 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 OVCH2Q7RTZ1 564 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 FAM71E2Q8N5Q1 922 aa12.96□□□□□ -0.33
PTPN9-201ENST00000306726 FREM2Q5SZK8 3169 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 H3BP45 60 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 H7C1Q1 480 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 SPRY1O43609 319 aaPredicted RBP12.96□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF16P17020 682 aaPredicted RBP12.96□□□□□ -0.34
PTPN9-201ENST00000306726 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.34
PTPN9-201ENST00000306726 FABP9Q0Z7S8 132 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 MICBQ29980 383 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF529Q6P280 563 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 OR2AE1Q8NHA4 323 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 SUCNR1Q9BXA5 334 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 PURGQ9UJV8 347 aaKnown RBP12.96□□□□□ -0.34
PTPN9-201ENST00000306726 TNFSF18Q9UNG2 199 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 NPTNQ9Y639 398 aa12.96□□□□□ -0.34
PTPN9-201ENST00000306726 A0A1W2PPH5 198 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 OR2F2O95006 317 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 VSIG8P0DPA2 414 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF44P15621 663 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 FBLP22087 321 aaKnown RBP12.95□□□□□ -0.34
PTPN9-201ENST00000306726 F2RL1P55085 397 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 OR2F1Q13607 317 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 HAGHQ16775 308 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 PEAR1Q5VY43 1037 aaPredicted RBP12.95□□□□□ -0.34
PTPN9-201ENST00000306726 OR1M1Q8NGA1 313 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 OR5AP2Q8NGF4 316 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 OR10C1Q96KK4 312 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 RAB33BQ9H082 229 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 RBM7Q9Y580 266 aaKnown RBP12.95□□□□□ -0.34
PTPN9-201ENST00000306726 ARHGAP21Q5T5U3 1957 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 SPTY2D1-AS1A0A0U1RR47 76 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 BCAT2O15382 392 aaPredicted RBP12.95□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF595Q8IYB9 648 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
PTPN9-201ENST00000306726 AKR7LQ8NHP1 331 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 TM4SF19Q96DZ7 209 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 LAT2Q9GZY6 243 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 HEATR1Q9H583 2144 aaKnown RBP12.95□□□□□ -0.34
PTPN9-201ENST00000306726 UQCC1Q9NVA1 299 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 ICAM5Q9UMF0 924 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 GPR37O15354 613 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 EDN3P14138 238 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 KLK2P20151 261 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 RPS4Y1P22090 263 aaKnown RBP12.95□□□□□ -0.34
PTPN9-201ENST00000306726 ABCD3P28288 659 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 SKP2Q13309 424 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 PBOV1Q9GZY1 135 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 EMC3Q9P0I2 261 aa12.95□□□□□ -0.34
PTPN9-201ENST00000306726 IFNA21P01568 189 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 SP9P0CG40 484 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 TMEM244Q5VVB8 128 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 CLEC18BQ6UXF7 455 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 C5orf24Q7Z6I8 188 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 MYPOPQ86VE0 399 aaPredicted RBP12.94□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF440Q8IYI8 595 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 EID2Q8N6I1 236 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF565Q8N9K5 539 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 OR8U1Q8NH10 309 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 IP6K3Q96PC2 410 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 ESRP2Q9H6T0 727 aaKnown RBP12.94□□□□□ -0.34
PTPN9-201ENST00000306726 SCPEP1Q9HB40 452 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 PPP4R1LQ9P1A2 415 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 WDFY4Q6ZS81 3184 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 A0A1W2PPE2 198 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 A0A1W2PR77 199 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 SULT2B1O00204 365 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 MTRF1O75570 445 aaKnown RBP12.94□□□□□ -0.34
PTPN9-201ENST00000306726 DUSP1P28562 367 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 FCGR2CP31995 323 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 NDUFA6P56556 154 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 RNF128Q8TEB7 428 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 PTPMT1Q8WUK0 201 aaPredicted RBP12.94□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF2Q9BSG1 426 aaPredicted RBP12.94□□□□□ -0.34
PTPN9-201ENST00000306726 PLEK2Q9NYT0 353 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 LINC00587B1AMM8 73 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 RNASEK-C17orf49H0YIS7 233 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 ZNF749O43361 778 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 CRABP1P29762 137 aa12.94□□□□□ -0.34
PTPN9-201ENST00000306726 HNRNPKP61978 463 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTPN9-201ENST00000306726 TMEM182Q6ZP80 229 aaPredicted RBP12.94□□□□□ -0.34
PTPN9-201ENST00000306726 LRP11Q86VZ4 500 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms