RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ZNF503-AS2A6NEH8 195 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 TNFRSF10AO00220 468 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 WISP2O76076 250 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 YES1P07947 543 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 MELTFP08582 738 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 AKAIN1P0CW23 69 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 VSIG10L2P0DP72 767 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 LIPCP11150 499 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 CD46P15529 392 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 GNB3P16520 340 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 THBS4P35443 961 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 TNFSF10P50591 281 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 ARG2P78540 354 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 SLC10A1Q14973 349 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 CDK10Q15131 360 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 CDNFQ49AH0 187 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 ZNF766Q5HY98 468 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 FIP1L1Q6UN15 594 aaKnown RBP5.71□□□□□ -1.5
USP47-201ENST00000305481 SLC36A1Q7Z2H8 476 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 ZNF101Q8IZC7 436 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 FAM109AQ8N4B1 249 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 OR4S1Q8NGB4 309 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 OR52H1Q8NGJ2 320 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 LINC00470Q9BZP3 86 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 TINAGL1Q9GZM7 467 aaPredicted RBP5.71□□□□□ -1.5
USP47-201ENST00000305481 BANF2Q9H503 90 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 SPRR3Q9UBC9 169 aa5.71□□□□□ -1.5
USP47-201ENST00000305481 M0QYG6 137 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 SOCS1O15524 211 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 SSX5O60225 188 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 CDC14BO60729 498 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ALX3O95076 343 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 APOC1P02654 83 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ZNF735P0CB33 412 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 FOSL1P15407 271 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 HTR5AP47898 357 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 TMEM50BP56557 158 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 MRPS15P82914 257 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 ARF1P84077 181 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 PLAC9Q5JTB6 97 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 C9orf135Q5VTT2 229 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 RAB12Q6IQ22 244 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 GLDNQ6ZMI3 551 aaPredicted RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 ZNF782Q6ZMW2 699 aaPredicted RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 NUFIP2Q7Z417 695 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 FGD2Q7Z6J4 655 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 FJX1Q86VR8 437 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 GVQW1Q8N7I0 195 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 TMEM229BQ8NBD8 167 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 FDCSPQ8NFU4 85 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 OR5D18Q8NGL1 313 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 OR10R2Q8NGX6 335 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 WDYHV1Q96HA8 205 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 SELENOIQ9C0D9 397 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 OR10A2Q9H208 303 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 NPDC1Q9NQX5 325 aaPredicted RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 B3GNT2Q9NY97 397 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 MUC6Q6W4X9 2439 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ZNF724A8MTY0 619 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 RPL36A-HNRNPH2H7BZ11 118 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 CDK2AP1O14519 115 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 TM4SF5O14894 197 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ZNHIT1O43257 154 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 SYNGR4O95473 234 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ACTL6AO96019 429 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 CD74P04233 296 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 PTGFRP43088 359 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 CCL11P51671 97 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ACTBP60709 375 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ACTG1P63261 375 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 PMP22Q01453 160 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 RBMS2Q15434 407 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 NRN1LQ496H8 165 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 PABPC1L2AQ5JQF8 200 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 OR2W3Q7Z3T1 314 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 SLC38A6Q8IZM9 456 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 CHST4Q8NCG5 386 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 NUDCD2Q8WVJ2 157 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 PP6455Q8WZ26 134 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 REEP6Q96HR9 211 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 GINS4Q9BRT9 223 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 TRAF4Q9BUZ4 470 aaPredicted RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 CHST6Q9GZX3 395 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ZDHHC11Q9H8X9 412 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 MCTS1Q9ULC4 181 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 DCHS1Q96JQ0 3298 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 MEIKINA0A087WXM9 373 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 A0A096LPE4 126 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 A0A1W2PPZ6 126 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 G3V3Q6 166 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 RGS13O14921 159 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 AKR7A2O43488 359 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 SSNA1O43805 119 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 PRAF2O60831 178 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 MPIG6BO95866 241 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 LCATP04180 440 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ERP29P30040 261 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 FAUP35544 74 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 ALDH3B1P43353 468 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 RRADP55042 308 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms