RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 FTMTQ8N4E7 242 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 SPTSSAQ969W0 71 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 SLC7A10Q9NS82 523 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 ABI3Q9P2A4 366 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 KCNK7Q9Y2U2 307 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 COL27A1Q8IZC6 1860 aaPredicted RBP12.75□□□□□ -0.37
SMG8-201ENST00000300917 MEIKINA0A087WXM9 373 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 A0A1B0GUH1 482 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 HRH1P35367 487 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 TSPAN5P62079 268 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 ARFRP1Q13795 201 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 PDCD1Q15116 288 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 FAM27BQ5VT28 67 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 OR51T1Q8NGJ9 327 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 ARHGAP5-AS1Q96IT6 56 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 LPAR5Q9H1C0 372 aa12.75□□□□□ -0.37
SMG8-201ENST00000300917 C21orf140B9A014 251 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 TMEM127O75204 238 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 HLA-HP01893 362 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 MEOX1P50221 254 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 GNG2P59768 71 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 MRPS34P82930 218 aaKnown RBP12.74□□□□□ -0.37
SMG8-201ENST00000300917 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 THOC7Q6I9Y2 204 aaKnown RBP12.74□□□□□ -0.37
SMG8-201ENST00000300917 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 DPCDQ9BVM2 203 aaPredicted RBP12.74□□□□□ -0.37
SMG8-201ENST00000300917 LDAHQ9H6V9 325 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 GPN1Q9HCN4 374 aaPredicted RBP12.74□□□□□ -0.37
SMG8-201ENST00000300917 SLC17A5Q9NRA2 495 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 RGS13O14921 159 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 ERCC1P07992 297 aaPredicted RBP12.74□□□□□ -0.37
SMG8-201ENST00000300917 GABRR1P24046 479 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 CCL11P51671 97 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 PPIAP62937 165 aaKnown RBP12.74□□□□□ -0.37
SMG8-201ENST00000300917 RNASE10Q5GAN6 216 aaKnown RBP12.74□□□□□ -0.37
SMG8-201ENST00000300917 PLAC9Q5JTB6 97 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 DCAF12L2Q5VW00 463 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 NTNG2Q96CW9 530 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 ST6GALNAC5Q9BVH7 336 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 GPR35Q9HC97 309 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 B4GALT7Q9UBV7 327 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 ZNF292O60281 2723 aa12.74□□□□□ -0.37
SMG8-201ENST00000300917 CDC14BO60729 498 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 BPNT1O95861 308 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 TMEM225BP0DP42 221 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 ARG2P78540 354 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 QRFPP83859 136 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 OR1F12Q8NHA8 337 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 ADAMTS17Q8TE56 1095 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 RAB3CQ96E17 227 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 REEP6Q96HR9 211 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 CITED4Q96RK1 184 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 S100A13Q99584 98 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 SF3B5Q9BWJ5 86 aaKnown RBP12.73□□□□□ -0.37
SMG8-201ENST00000300917 UBE2QL1A1L167 161 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 CCSO14618 274 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 RAD51DO75771 328 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 DHRS3O75911 302 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 TGM6O95932 706 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 ZNF35P13682 527 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 PI3P19957 117 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 LHX2P50458 406 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 DNM1P46Q6ZS02 220 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 CASTOR1Q8WTX7 329 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 CPNE4Q96A23 557 aaPredicted RBP12.73□□□□□ -0.37
SMG8-201ENST00000300917 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 WISP2O76076 250 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 RAG2P55895 527 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 ARF1P84077 181 aaKnown RBP12.73□□□□□ -0.37
SMG8-201ENST00000300917 AIMP2Q13155 320 aaKnown RBP12.73□□□□□ -0.37
SMG8-201ENST00000300917 PGAP1Q75T13 922 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 UQCC2Q9BRT2 126 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 OR10A2Q9H208 303 aa12.73□□□□□ -0.37
SMG8-201ENST00000300917 TMA7Q9Y2S6 64 aaKnown RBP12.73□□□□□ -0.37
SMG8-201ENST00000300917 TMEM14DPA8MWL7 114 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 SDCBPO00560 298 aaPredicted RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 CFPP27918 469 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 AP2S1P53680 142 aaPredicted RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 SNU13P55769 128 aaKnown RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 MTCP1P56278 107 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 TMEM50BP56557 158 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 LGALSLQ3ZCW2 172 aaPredicted RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 LRRC37A5PQ49AS3 106 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 PABPC1L2AQ5JQF8 200 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 ZNF626Q68DY1 528 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 PNLDC1Q8NA58 520 aaKnown RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 AQP3Q92482 292 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 C1orf147Q96MC9 270 aaPredicted RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 RANBP3Q9H6Z4 567 aaPredicted RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 PRR14LQ5THK1 2151 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 AKAP13Q12802 2813 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 TERTO14746 1132 aaKnown RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 SSX5O60225 188 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 PRAF2O60831 178 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 ZNF205O95201 554 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms