RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 FAM3AP98173 230 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 SURF2Q15527 256 aaPredicted RBP11.55□□□□□ -0.56
TVP23A-201ENST00000299866 SOHLH1Q5JUK2 328 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF574Q6ZN55 896 aaPredicted RBP11.55□□□□□ -0.56
TVP23A-201ENST00000299866 Q7L0L9 218 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF321PQ8N8H1 164 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 LYPD6BQ8NI32 183 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 FNDC9Q8TBE3 224 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 SCGB3A2Q96PL1 93 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 RARRES2Q99969 163 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 GPR61Q9BZJ8 451 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 SH3BGRL3Q9H299 93 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 PRDM13Q9H4Q3 707 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 PARPBPQ9NWS1 579 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 HDGFL3Q9Y3E1 203 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 CDC14CA4D256 554 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 SRSF10O75494 262 aaKnown RBP11.55□□□□□ -0.56
TVP23A-201ENST00000299866 PPP1CCP36873 323 aaKnown RBP11.55□□□□□ -0.56
TVP23A-201ENST00000299866 RBP2P50120 134 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 VAX1Q5SQQ9 334 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 AADACL3Q5VUY0 350 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 STX12Q86Y82 276 aa11.55□□□□□ -0.56
TVP23A-201ENST00000299866 CCNL2Q96S94 520 aaPredicted RBP11.55□□□□□ -0.56
TVP23A-201ENST00000299866 XRCC2O43543 280 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 KAT7O95251 611 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 HIST1H1DP16402 221 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 TMEM50BP56557 158 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 SUMF2Q8NBJ7 301 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF519Q8TB69 540 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 FAM213BQ8TBF2 198 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 OR11A1Q9GZK7 315 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 RCL1Q9Y2P8 373 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 MRPS28Q9Y2Q9 187 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 VCANP13611 3396 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 TRAV36DV7A0A075B6V5 113 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 CRTAPO75718 401 aaPredicted RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 NSA2O95478 260 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 GAPDHP04406 335 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 RNH1P13489 461 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 C5AR1P21730 350 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 CHATP28329 748 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 PTGER4P35408 488 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 OR3A4PP47883 348 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 ASCL1P50553 236 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 FNDC7Q5VTL7 733 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 NXF5Q9H1B4 397 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 PPP4R1LQ9P1A2 415 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 ZDHHC8Q9ULC8 765 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 B3GALT5Q9Y2C3 310 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 TMEM14DPA8MWL7 114 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 ISG15P05161 165 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 GUSBP08236 651 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 DANCRP0C864 163 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 SNU13P55769 128 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF117Q03924 483 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 C1orf140Q5VVS0 124 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 PEG10Q86TG7 708 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF610Q8N9Z0 462 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 OR5D14Q8NGL3 314 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 MRPL24Q96A35 216 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 GAL3ST4Q96RP7 486 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 GPER1Q99527 375 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 WFDC1Q9HC57 220 aa11.54□□□□□ -0.56
TVP23A-201ENST00000299866 C14orf166Q9Y224 244 aaKnown RBP11.54□□□□□ -0.56
TVP23A-201ENST00000299866 DEDDO75618 318 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 DIRAS3O95661 229 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 RPS2P15880 293 aaKnown RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF20P17024 532 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 GABRA4P48169 554 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 RAB1AP62820 205 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SLC35A1P78382 337 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 APCDD1LQ8NCL9 501 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF726A6NNF4 738 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 MASP2O00187 686 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SCGNO76038 276 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 TTRP02766 147 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 CHRM2P08172 466 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 CXCL1P09341 107 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 GLI4P10075 376 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SLC2A1P11166 492 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 TAGLN2P37802 199 aaKnown RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 GGNBP1Q5YKI7 109 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 TMEM182Q6ZP80 229 aaPredicted RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 OR5D18Q8NGL1 313 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 DEFB118Q96PH6 123 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 S100A13Q99584 98 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SSX3Q99909 188 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SOX7Q9BT81 388 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 SUCNR1Q9BXA5 334 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 TMEM59Q9BXS4 323 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 TCEAL2Q9H3H9 227 aaPredicted RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 PNO1Q9NRX1 252 aaKnown RBP11.53□□□□□ -0.56
TVP23A-201ENST00000299866 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
TVP23A-201ENST00000299866 A0A087X0M5 115 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms