RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CHST6Q9GZX3 395 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 MPZL1O95297 269 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 ICAM2P13598 275 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 CTRB1P17538 263 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 CTRB2Q6GPI1 263 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 MRM1Q6IN84 353 aaKnown RBP13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 LINC01555Q8NAE3 123 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 TMEM104Q8NE00 496 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 APH1AQ96BI3 265 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 COL4A1P02462 1669 aa13.79□□□□□ -0.2
SHROOM4-201ENST00000289292 PNPP00491 289 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 MPGP29372 298 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 LIMK1P53667 647 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 C17orf78Q8N4C9 275 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 OR2AE1Q8NHA4 323 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 ROBO4Q8WZ75 1007 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 MUCL1Q96DR8 90 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 ANKUB1A6NFN9 424 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 FRG2CA6NGY1 282 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 FGF7P21781 194 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 TSPAN32Q96QS1 320 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF251Q9BRH9 671 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 DEFB127Q9H1M4 99 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 hCG_1809904A0A1W2PP81 198 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 A0A1W2PR64 198 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 A0A1W2PRV1 198 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF732B4DXR9 585 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 LANCL1O43813 399 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 ALKBH6Q3KRA9 238 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 SLC25A26Q70HW3 274 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 OXGR1Q96P68 337 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 OR8B4Q96RC9 309 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 TIMM10BQ9Y5J6 103 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 GLI3P10071 1580 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 TNFRSF10CO14798 259 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 OR3A4PP47883 348 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 CYB561P49447 251 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 RAB32Q13637 225 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF596Q8TC21 504 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 RTL8AQ9BWD3 113 aa13.78□□□□□ -0.2
SHROOM4-201ENST00000289292 PAPPAQ13219 1627 aa13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 CDKN2AP42771 156 aaKnown RBP13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 OR4D10Q8NGI6 311 aa13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 ACTR3CQ9C0K3 210 aaPredicted RBP13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 SIRT3Q9NTG7 399 aaPredicted RBP13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 CCL11P51671 97 aa13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 GPM6AP51674 278 aa13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 SLC24A4Q8NFF2 622 aa13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 DNAJB12Q9NXW2 375 aaKnown RBP13.77□□□□□ -0.2
SHROOM4-201ENST00000289292 CCDC187A0A096LP49 1063 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 METTL12A8MUP2 240 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 SLC31A2O15432 143 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 ZNF79Q15937 498 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 NOXO1Q8NFA2 376 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 OR11L1Q8NGX0 322 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 BMP5P22003 454 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 VASH2Q86V25 355 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 ETFBKMTQ8IXQ9 262 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 B3GAT1Q9P2W7 334 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 MRPS2Q9Y399 296 aaKnown RBP13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 STRCQ7RTU9 1775 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 PTBP3O95758 552 aaKnown RBP13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 SLC37A1P57057 533 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 C9orf152Q5JTZ5 239 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 SPATA46Q5T0L3 261 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 OSR2Q8N2R0 312 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 ERGIC1Q969X5 290 aa13.77□□□□□ -0.21
SHROOM4-201ENST00000289292 SERTM2A0A1B0GWG4 89 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 ANKRD20A5PA0PJZ0 165 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 WNT11O96014 354 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 GGNBP1Q5YKI7 109 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 TMPRSS11FQ6ZWK6 438 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 TRILQ7L0X0 811 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 UCK1Q9HA47 277 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 SERGEFQ9UGK8 458 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 OLFM2O95897 454 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 SLC25A4P12235 298 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 CD27P26842 260 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 PRSS12P56730 875 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 ZNF117Q03924 483 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 SHBQ15464 509 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 OR10P1Q8NGE3 313 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 HGDQ93099 445 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 ELSPBP1Q96BH3 223 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 SOX7Q9BT81 388 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 MTFP1Q9UDX5 166 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 MEX3AA1L020 520 aaKnown RBP13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 MLF2Q15773 248 aaPredicted RBP13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 LGALSLQ3ZCW2 172 aaPredicted RBP13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 ELFN2Q5R3F8 820 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 DUSP18Q8NEJ0 188 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 DECR2Q9NUI1 292 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 ZNF586Q9NXT0 402 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms