RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MMP15P51511 669 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 KLF3P57682 345 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 LSM3P62310 102 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 TMEM42Q69YG0 159 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 Q6ZR03 302 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 CCDC54Q8NEL0 328 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 DHRS9Q9BPW9 319 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 ENPP5Q9UJA9 477 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 PTPN13Q12923 2485 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 AKAP6Q13023 2319 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 CELSR2Q9HCU4 2923 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 ARFGEF3Q5TH69 2177 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 RAI1Q7Z5J4 1906 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 TRAV8-7A0A075B6U6 113 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 SERPINA12Q8IW75 414 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 GTF3AQ92664 365 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 PLK3Q9H4B4 646 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 PLEKHA1Q9HB21 404 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 SSR3Q9UNL2 185 aa18.62■□□□□ 0.57
PDLIM3-203ENST00000284771 NBPF19A0A087WUL8 3843 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 GABARAPO95166 117 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 UBE2V2Q15819 145 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 OR8G5Q8NG78 346 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 UBASH3BQ8TF42 649 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 DVL3Q92997 716 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 C10orf35Q96D05 121 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 MSL2Q9HCI7 577 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 CENPEQ02224 2701 aa18.61■□□□□ 0.57
PDLIM3-203ENST00000284771 IGKV1-9A0A0C4DH69 117 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 ZNF816-ZNF321PA0A0X1KG74 233 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 TIMM8AO60220 97 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 GMDSO60547 372 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 GOSR1O95249 250 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 CST4P01036 141 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 RAF1P04049 648 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 CD2P06729 351 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 SELEP16581 610 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 IGFBP3P17936 291 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 ZBTB37Q5TC79 503 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 HIST2H2BCQ6DN03 193 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 ZNF529Q6P280 563 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 CSNK2A3Q8NEV1 391 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 OR51A2Q8NGJ7 313 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 PIGCQ92535 297 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 FBXW5Q969U6 566 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 SLC30A2Q9BRI3 323 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 CHST5Q9GZS9 411 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 TAS2R4Q9NYW5 299 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 MRPL15Q9P015 296 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 TAAR3PQ9P1P4 343 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 GPR160Q9UJ42 338 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 ZNF850A8MQ14 1090 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 H0YL77 283 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 HS3ST1O14792 307 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 ZNF20P17024 532 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 SRMP19623 302 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 CA6P23280 308 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 MAPK3P27361 379 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 CALRP27797 417 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 GNALP38405 381 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 VBP1P61758 197 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 NCS1P62166 190 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 SWI5Q1ZZU3 235 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 TIMM50Q3ZCQ8 353 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 GDPGP1Q6ZNW5 385 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 MUC15Q8N387 334 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 ITFG2Q969R8 447 aa18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 FGF23Q9GZV9 251 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-203ENST00000284771 NRASP01111 189 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 DANCRP0C864 163 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 ALDH3B1P43353 468 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 EVX1P49640 407 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 EFNB3Q15768 340 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 CEP78Q5JTW2 689 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 FOXB2Q5VYV0 432 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 OR5D14Q8NGL3 314 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 OR13C9Q8NGT0 318 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 PHYHIPQ92561 330 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 PAPOLGQ9BWT3 736 aaKnown RBP18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 CLEC4MQ9H2X3 399 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 PLEKHF2Q9H8W4 249 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 GPR173Q9NS66 373 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 FBN2P35556 2912 aa18.59■□□□□ 0.57
PDLIM3-203ENST00000284771 A0A1B0GWJ7 208 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 ZSCAN5BA6NJL1 495 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 MLNRO43193 412 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 CD8AP01732 235 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 SOD3P08294 240 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 PRDX4Q13162 271 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 HSD17B12Q53GQ0 312 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 CLVS2Q5SYC1 327 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 RNF144BQ7Z419 303 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 PP6455Q8WZ26 134 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 ZCCHC4Q9H5U6 513 aa18.58■□□□□ 0.57
PDLIM3-203ENST00000284771 A0A1W2PPW3 197 aa18.57■□□□□ 0.56
PDLIM3-203ENST00000284771 A6NHS1 94 aa18.57■□□□□ 0.56
PDLIM3-203ENST00000284771 ANKRD30BLA7E2S9 258 aa18.57■□□□□ 0.56
PDLIM3-203ENST00000284771 VSTM5A8MXK1 200 aa18.57■□□□□ 0.56
PDLIM3-203ENST00000284771 ADRA2CP18825 462 aa18.57■□□□□ 0.56
PDLIM3-203ENST00000284771 FSTP19883 344 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms