RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 FBXO4Q9UKT5 387 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 FLVCR2Q9UPI3 526 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 PPP1R3CQ9UQK1 317 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 SSUH2Q9Y2M2 353 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 MYOFQ9NZM1 2061 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 FOCADQ5VW36 1801 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 ATAD5Q96QE3 1844 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 AKAP6Q13023 2319 aa10.09□□□□□ -0.79
USP6NL-201ENST00000277575 TCRBV16S1A1N1A0A5B0 115 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 CNIH1O95406 144 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 HLA-HP01893 362 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 DUSP1P28562 367 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 GAB4Q2WGN9 574 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 OR2B11Q5JQS5 317 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 OR4D11Q8NGI4 311 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 SERPINE3A8MV23 424 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 FFAR1O14842 300 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 HPP00738 406 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 BMP5P22003 454 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 GALNSP34059 522 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 GPR12P47775 334 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 GNG3P63215 75 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 RBMS3Q6XE24 437 aaKnown RBP10.08□□□□□ -0.8
USP6NL-201ENST00000277575 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.08□□□□□ -0.8
USP6NL-201ENST00000277575 FAM185AQ8N0U4 392 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 OR5H6Q8NGV6 325 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 LILRB4Q8NHJ6 448 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 M1APQ8TC57 530 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 PTPMT1Q8WUK0 201 aaPredicted RBP10.08□□□□□ -0.8
USP6NL-201ENST00000277575 S1PR3Q99500 378 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 GDF15Q99988 308 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 AKIP1Q9NQ31 210 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 CYSLTR2Q9NS75 346 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 A0A1W2PQD3 144 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 FCARP24071 287 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 S100A7P31151 101 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 BAMBIQ13145 260 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 SMIM21Q3B7S5 101 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 PABPC1L2AQ5JQF8 200 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 ZNF774Q6NX45 483 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 TMEM52Q8NDY8 209 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 FBXO17Q96EF6 278 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 C10orf90Q96M02 699 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 ZNF416Q9BWM5 594 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 SLIRPQ9GZT3 109 aaKnown RBP10.08□□□□□ -0.8
USP6NL-201ENST00000277575 BIN3Q9NQY0 253 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 NBASA2RRP1 2371 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 A0A1B0GTH9 108 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 SPAARA0A1B0GVQ0 90 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 HTD2P86397 168 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 MAMSTRQ6ZN01 415 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 CREB3L2Q70SY1 520 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 LSMEM1Q8N8F7 131 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 OR1S2Q8NGQ3 325 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 EDARQ9UNE0 448 aa10.08□□□□□ -0.8
USP6NL-201ENST00000277575 TDRD6O60522 2096 aaKnown RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 A0A1W2PR80 420 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 TERTO14746 1132 aaKnown RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 C1QBP02746 253 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 CT45A8P0DMV1 189 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 CT45A9P0DMV2 189 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 DEFA4P12838 97 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 FUT3P21217 361 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 GPM6AP51674 278 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 CT45A2Q5DJT8 189 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 ATG4DQ86TL0 474 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SVBPQ8N300 66 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 OR2AK2Q8NG84 335 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 OR4C16Q8NGL9 310 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 DAZAP1Q96EP5 407 aaKnown RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 TECTBQ96PL2 329 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 PUS1Q9Y606 427 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 ZNF85Q03923 595 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 OR2T2Q6IF00 324 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SSX9Q7RTT3 188 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 TSEN54Q7Z6J9 526 aaKnown RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 RTN4IP1Q8WWV3 396 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SARGQ9BW04 601 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SAV1Q9H4B6 383 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 OR5H15A6NDH6 313 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 C21orf140B9A014 251 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 H3BMH7 237 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 HPNP05981 417 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 PATE4P0C8F1 98 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 INSL4Q14641 139 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 KISS1Q15726 138 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SSX1Q16384 188 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SOHLH1Q5JUK2 328 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 TMEM268Q5VZI3 342 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 C8orf82Q6P1X6 216 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 TMPRSS7Q7RTY8 843 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SLC22A18ASQ8N1D0 253 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 UHRF2Q96PU4 802 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SUCNR1Q9BXA5 334 aa10.07□□□□□ -0.8
USP6NL-201ENST00000277575 ZNF71Q9NQZ8 489 aaPredicted RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 SPTBN1Q01082 2364 aaKnown RBP10.07□□□□□ -0.8
USP6NL-201ENST00000277575 MPZL1O95297 269 aa10.06□□□□□ -0.8
USP6NL-201ENST00000277575 OR4E1P0C645 316 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms