RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 EXTL2Q9UBQ6 330 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 ATPIF1Q9UII2 106 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 CADP27708 2225 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 TALDO1P37837 337 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 BEX5Q5H9J7 111 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 FBXW9Q5XUX1 488 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 ZNF774Q6NX45 483 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 Q6ZSR3 168 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 DOK3Q7L591 496 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 PLPP7Q8NBV4 271 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 CCDC54Q8NEL0 328 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 FGFBP3Q8TAT2 258 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 FOXC2Q99958 501 aa21.28■■□□□ 1
SSBP4-201ENST00000270061 A0A0B4J203 849 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 TPTEP56180 551 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 FAPQ12884 760 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 OXA1LQ15070 435 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 SLC36A2Q495M3 483 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 DCDC5Q6ZRR9 648 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 OR1J2Q8NGS2 313 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 LGALS14Q8TCE9 139 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 FGGYQ96C11 551 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 USB1Q9BQ65 265 aaKnown RBP21.27■■□□□ 1
SSBP4-201ENST00000270061 LIN7BQ9HAP6 207 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 GPR84Q9NQS5 396 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 STEAP1Q9UHE8 339 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 ETV7Q9Y603 341 aa21.27■■□□□ 1
SSBP4-201ENST00000270061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-201ENST00000270061 LMX1BO60663 402 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 DDOSTP39656 456 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 PYDC2Q56P42 97 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 UBE2NLQ5JXB2 153 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 GLT8D1Q68CQ7 371 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 ZNF529Q6P280 563 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 BHLHA15Q7RTS1 189 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-201ENST00000270061 NAA40Q86UY6 237 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 OR8H2Q8N162 312 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 UBE2J2Q8N2K1 259 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 CENPSQ8N2Z9 138 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 DNAAF1Q8NEP3 725 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 HS3ST6Q96QI5 342 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 ZNF224Q9NZL3 707 aa21.26■□□□□ 0.99
SSBP4-201ENST00000270061 ZNF469Q96JG9 3925 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-201ENST00000270061 LYZL6O75951 148 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 PATE4P0C8F1 98 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 MPGP29372 298 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 SLC6A9P48067 706 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 IL18Q14116 193 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 BAK1Q16611 211 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 FAM166AQ6J272 317 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 ALKBH2Q6NS38 261 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 OR4M1Q8NGD0 313 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 OR52H1Q8NGJ2 320 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 AKR7LQ8NHP1 331 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 SLC7A6Q92536 515 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 MBD6Q96DN6 1003 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 SP140LQ9H930 580 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 OR5V1Q9UGF6 321 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 RAI1Q7Z5J4 1906 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-201ENST00000270061 SLC17A2O00624 439 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 DBHP09172 617 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 LOXP28300 417 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-201ENST00000270061 FOXG1P55316 489 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-201ENST00000270061 P2RY14Q15391 338 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 NKAIN3Q8N8D7 197 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 OR5D14Q8NGL3 314 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 ADAT3Q96EY9 351 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-201ENST00000270061 C14orf119Q9NWQ9 140 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 RABL2AQ9UBK7 228 aaPredicted RBP21.25■□□□□ 0.99
SSBP4-201ENST00000270061 RABL2BQ9UNT1 228 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 N6AMT1Q9Y5N5 214 aa21.25■□□□□ 0.99
SSBP4-201ENST00000270061 IL7P13232 177 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 COX5AP20674 150 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 IGHV1-2P23083 117 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 ANOS1P23352 680 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 AZGP1P25311 298 aaKnown RBP21.24■□□□□ 0.99
SSBP4-201ENST00000270061 HTR5AP47898 357 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 TAB1Q15750 504 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 DPPA2Q7Z7J5 298 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 FOXRED1Q96CU9 486 aaPredicted RBP21.24■□□□□ 0.99
SSBP4-201ENST00000270061 PLPPR2Q96GM1 343 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 OR10A2Q9H208 303 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 CXXC4Q9H2H0 198 aa21.24■□□□□ 0.99
SSBP4-201ENST00000270061 LOC390937A0A1W2PQ73 354 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 CSF3P09919 207 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 COX5BP10606 129 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 NR4A2P43354 598 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 PITPNBP48739 271 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 DEFA1P59665 94 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 DEFA3P59666 94 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 BAIAP2L2Q6UXY1 529 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 LYPD6Q86Y78 171 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 OR14K1Q8NGZ2 314 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 SETD6Q8TBK2 473 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 ABCG5Q9H222 651 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 NGBQ9NPG2 151 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 CLDN12P56749 244 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 PABPC1L2AQ5JQF8 200 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 PYHIN1Q6K0P9 492 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 PGAP1Q75T13 922 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms