RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PAPOLGQ9BWT3 736 aaKnown RBP10.8□□□□□ -0.68
SS18-202ENST00000269138 RASSF4Q9H2L5 321 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 CHCHD3Q9NX63 227 aaKnown RBP10.8□□□□□ -0.68
SS18-202ENST00000269138 IL19Q9UHD0 177 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 PIGLQ9Y2B2 252 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 SIRT4Q9Y6E7 314 aaPredicted RBP10.8□□□□□ -0.68
SS18-202ENST00000269138 A0A1B0GVI7 797 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 LOC107986453A0A1B0GWG9 222 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 LOC390937A0A1W2PQ73 354 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 ZNF850A8MQ14 1090 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 DHRS3O75911 302 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CCDC159P0C7I6 412 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CCL1P22362 96 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CRHBPP24387 322 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CCR9P51686 369 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 DSCR9P59020 149 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 MRPS11P82912 194 aaKnown RBP10.79□□□□□ -0.68
SS18-202ENST00000269138 RIPPLY1Q0D2K3 151 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 PRDX4Q13162 271 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 RIN1Q13671 783 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 Q6ZSR3 168 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 EGFL6Q8IUX8 553 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 SEMA6DQ8NFY4 1073 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 OR10AC1Q8NH08 325 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 OR52N1Q8NH53 320 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 PIGCQ92535 297 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CCL17Q92583 94 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 MYDGFQ969H8 173 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 FGF23Q9GZV9 251 aaPredicted RBP10.79□□□□□ -0.68
SS18-202ENST00000269138 SLC22A4Q9H015 551 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 Q9H521 79 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 DUSP21Q9H596 190 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 ZNF275Q9NSD4 429 aaPredicted RBP10.79□□□□□ -0.68
SS18-202ENST00000269138 BABAM2Q9NXR7 383 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 TPRKBQ9Y3C4 175 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 V9GYS6 101 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 LOC100289279A0A1B0GTE1 492 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 RNF223E7ERA6 249 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 H7C1Q1 480 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 SYT7O43581 403 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 GMDSO60547 372 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CST4P01036 141 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CSF3P09919 207 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 ATP6V1B1P15313 513 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 PMELP40967 661 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CD200P41217 278 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 TGM4P49221 684 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 SRP9P49458 86 aaKnown RBP10.79□□□□□ -0.68
SS18-202ENST00000269138 MED21Q13503 144 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 MPPED2Q15777 294 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 PRAMEF6Q5VXH4 476 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 DOK3Q7L591 496 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 MOGAT3Q86VF5 341 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 NANOGP1Q8N7R0 232 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 PDCD1LG2Q9BQ51 273 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 CHODLQ9H9P2 273 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
SS18-202ENST00000269138 MYOZ1Q9NP98 299 aaPredicted RBP10.79□□□□□ -0.68
SS18-202ENST00000269138 VPS13CQ709C8 3753 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 ZNF816-ZNF321PA0A0X1KG74 233 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 VWC2LB2RUY7 222 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 MTRF1O75570 445 aaKnown RBP10.78□□□□□ -0.68
SS18-202ENST00000269138 ZFPL1O95159 310 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 MT-ND2P03891 347 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 UBCP0CG48 685 aaKnown RBP10.78□□□□□ -0.68
SS18-202ENST00000269138 TNFRSF1AP19438 455 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 ACHEP22303 614 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 GIFP27352 417 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 GNALP38405 381 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 IRF3Q14653 427 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 RBM48Q5RL73 367 aaKnown RBP10.78□□□□□ -0.68
SS18-202ENST00000269138 KRT74Q7RTS7 529 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 WDR86Q86TI4 376 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 ZNF676Q8N7Q3 588 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 ZFP41Q8N8Y5 198 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 OR51A4Q8NGJ6 313 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 OR8S1Q8NH09 359 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 ZNF420Q8TAQ5 688 aaPredicted RBP10.78□□□□□ -0.68
SS18-202ENST00000269138 HPSE2Q8WWQ2 592 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 ITPKCQ96DU7 683 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 CDCA4Q9BXL8 241 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 REG4Q9BYZ8 158 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 DLL4Q9NR61 685 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 UFSP2Q9NUQ7 469 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 PPP1R3CQ9UQK1 317 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 MPC1Q9Y5U8 109 aa10.78□□□□□ -0.68
SS18-202ENST00000269138 CHD3Q12873 2000 aaKnown RBP10.78□□□□□ -0.68
SS18-202ENST00000269138 A0A096LNT2 108 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 TRBV2A0A0J9YWF9 115 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 WNT9BO14905 357 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 SMAD7O15105 426 aaKnown RBP10.77□□□□□ -0.69
SS18-202ENST00000269138 OGG1O15527 345 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 PPIHO43447 177 aaKnown RBP10.77□□□□□ -0.69
SS18-202ENST00000269138 RGS10O43665 173 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 ISG15P05161 165 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 GRPP07492 148 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 THBS2P35442 1172 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 NR4A2P43354 598 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms