RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 FAM90A1Q86YD7 464 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 ERI1Q8IV48 349 aaKnown RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 C11orf53Q8IXP5 236 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 TIGD4Q8IY51 512 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 ADGRG5Q8IZF4 528 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 GCSAMQ8N6F7 178 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 IQCF1Q8N6M8 205 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 OR52H1Q8NGJ2 320 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 TEX47Q8TBZ9 253 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 CCDC124Q96CT7 223 aaKnown RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 REEP6Q96HR9 211 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 LRGUKQ96M69 825 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 AMELYQ99218 206 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 MMADHCQ9H3L0 296 aaPredicted RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 SP140LQ9H930 580 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 TRIM36Q9NQ86 728 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 C14orf119Q9NWQ9 140 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 ZNF319Q9P2F9 582 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 hCG_38984A0A1B0GV85 526 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 A6NLC8 198 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 AQP12BA6NM10 295 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 ZNF879B4DU55 563 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 H3BN98 237 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 TBX1O43435 398 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 ADAM20O43506 726 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 FCN3O75636 299 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 CST1P01037 141 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 GYPAP02724 150 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 SFTPBP07988 381 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 MMP9P14780 707 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 HSD11B1P28845 292 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 CFHR2P36980 270 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 GSK3AP49840 483 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 ZNF121P58317 390 aaPredicted RBP8.06□□□□□ -1.12
VPS41-201ENST00000265745 GINS1Q14691 196 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 TIGD6Q17RP2 521 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 DEFB112Q30KQ8 113 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 KLHL12Q53G59 568 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 TM4SF20Q53R12 229 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 TEX36Q5VZQ5 186 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 C16orf87Q6PH81 154 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 SHISA2Q6UWI4 295 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 BRD3OSQ6XYD6 125 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 FAM57BQ71RH2 274 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 SHFQ7M4L6 423 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 WDR86Q86TI4 376 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 AQP12AQ8IXF9 295 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 OR6N2Q8NGY6 317 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 CANT1Q8WVQ1 401 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 OTULINQ96BN8 352 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 TECTBQ96PL2 329 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 THTPAQ9BU02 230 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 OR51V1Q9H2C8 321 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 RNPEPL1Q9HAU8 725 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 SMURF1Q9HCE7 757 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 PDP1Q9P0J1 537 aaPredicted RBP8.06□□□□□ -1.12
VPS41-201ENST00000265745 KAAG1Q9UBP8 84 aa8.06□□□□□ -1.12
VPS41-201ENST00000265745 MDFIC2A0A1B0GVS7 189 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 hCG_1807616A0A1W2PRN6 198 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 ANKRD34BA5PLL1 514 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 P2RY10O00398 339 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 DVL1O14640 695 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 HOXA3O43365 443 aaPredicted RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 TOX4O94842 621 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 ECDO95905 644 aaPredicted RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 HMGN1P05114 100 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 MUC1P15941 1255 aaPredicted RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 HOXB6P17509 224 aaKnown RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 PAICSP22234 425 aaKnown RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 CFL1P23528 166 aaKnown RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 POU1F1P28069 291 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 IL13RA1P78552 427 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 CDK5Q00535 292 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 GPR157Q5UAW9 335 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 PLBD1Q6P4A8 553 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 WDR82Q6UXN9 313 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 Q6YL49 198 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 BTN2A1Q7KYR7 527 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 GALNT4Q8N4A0 578 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 PNLDC1Q8NA58 520 aaKnown RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 OR1M1Q8NGA1 313 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 OR8S1Q8NH09 359 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 OTOSQ8NHW6 89 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 LRRC29Q8WV35 223 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 TAF15Q92804 592 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS41-201ENST00000265745 WDFY2Q96P53 400 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 TBX15Q96SF7 602 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 PCGF1Q9BSM1 259 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 OR10A2Q9H208 303 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 RGCCQ9H4X1 137 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 PPP1R3EQ9H7J1 279 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 UNKLQ9H9P5 680 aaKnown RBP8.05□□□□□ -1.12
VPS41-201ENST00000265745 NOX4Q9NPH5 578 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 DNAJC27Q9NZQ0 273 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 RHBDD3Q9Y3P4 386 aa8.05□□□□□ -1.12
VPS41-201ENST00000265745 IGHV3OR15-7A0A075B7D8 119 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 CENPVL3A0A0U1RRI6 287 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 SRRM5B3KS81 715 aa8.04□□□□□ -1.12
VPS41-201ENST00000265745 PRR23D1E9PI22 279 aaPredicted RBP8.04□□□□□ -1.12
VPS41-201ENST00000265745 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms