RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 TMEM104Q8NE00 496 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 OR13D1Q8NGV5 346 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 OR14K1Q8NGZ2 314 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 SLC25A31Q9H0C2 315 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 TCEAL2Q9H3H9 227 aaPredicted RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 TAS2R4Q9NYW5 299 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 GTF2A1LQ9UNN4 478 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 DHDHQ9UQ10 334 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 MMACHCQ9Y4U1 282 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 URGCP-MRPS24S4R325 110 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 F5P12259 2224 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TGIF2-C20orf24A0A0A6YYL0 155 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 A0A1W2PQU0 124 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 WIPF3A6NGB9 483 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 SERINC4A6NH21 518 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 ZNF860A6NHJ4 632 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 H0YGG7 62 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 PLRG1O43660 514 aaKnown RBP11.67□□□□□ -0.54
NUP54-201ENST00000264883 DANCRP0C864 163 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TRGC1P0CF51 173 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
NUP54-201ENST00000264883 ARF3P61204 181 aaPredicted RBP11.67□□□□□ -0.54
NUP54-201ENST00000264883 ANKRD55Q3KP44 614 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 WBP2NLQ6ICG8 309 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 DPY19L4Q7Z388 723 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 ZNF101Q8IZC7 436 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 KDM8Q8N371 416 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 JAGN1Q8N5M9 183 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 LRRC75AQ8NAA5 344 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TERB2Q8NHR7 220 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 MFSD8Q8NHS3 518 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TMEM230Q96A57 120 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 FAM131CQ96AQ9 280 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 CMBLQ96DG6 245 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 HIST1H2BLQ99880 126 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 FGF22Q9HCT0 170 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 C19orf12Q9NSK7 152 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 SERGEFQ9UGK8 458 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TRIOBPQ9H2D6 2365 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 RENP00797 406 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 IGKV1D-16P01601 117 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 APODP05090 189 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 ALOX5APP20292 161 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 IGFBP4P22692 258 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
NUP54-201ENST00000264883 FHITP49789 147 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TMEM33P57088 247 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 SLC35A1P78382 337 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 JOSD1Q15040 202 aaPredicted RBP11.67□□□□□ -0.54
NUP54-201ENST00000264883 PPA1Q15181 289 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 ALG10Q5BKT4 473 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 LRRC69Q6ZNQ3 347 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 C5orf24Q7Z6I8 188 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 OR9A4Q8NGU2 314 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 RELTQ969Z4 430 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 VSTM2LQ96N03 204 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 C5orf66Q9H5L9 145 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 TMEM74BQ9NUR3 256 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 VSX1Q9NZR4 365 aaPredicted RBP11.67□□□□□ -0.54
NUP54-201ENST00000264883 SLC22A13Q9Y226 551 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 MEMO1Q9Y316 297 aa11.67□□□□□ -0.54
NUP54-201ENST00000264883 A0A087WZY1 265 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 CCDC187A0A096LP49 1063 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 CD200P41217 278 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 ERVFRD-1P60508 538 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 IL15RAQ13261 267 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 ZNF74Q16587 644 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.66□□□□□ -0.54
NUP54-201ENST00000264883 SLC22A25Q6T423 547 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 BAHD1Q8TBE0 780 aaPredicted RBP11.66□□□□□ -0.54
NUP54-201ENST00000264883 RAB39BQ96DA2 213 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 OR14J1Q9UGF5 321 aa11.66□□□□□ -0.54
NUP54-201ENST00000264883 A0A087WWC5 75 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 K7EQS6 105 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 DVL1O14640 695 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 PRH1P02810 166 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 TBPP20226 339 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 KIR2DL1P43626 348 aaPredicted RBP11.65□□□□□ -0.54
NUP54-201ENST00000264883 CTXN1P60606 82 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 SLC10A1Q14973 349 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 LRRC18Q8N456 261 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 CSNK1A1LQ8N752 337 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 OR4K15Q8NH41 348 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 MOGAT1Q96PD6 335 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 GRHPRQ9UBQ7 328 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 GPR132Q9UNW8 380 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 MRPS2Q9Y399 296 aaKnown RBP11.65□□□□□ -0.54
NUP54-201ENST00000264883 IGKV1D-42A0A075B6H8 117 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 H3BQ15 152 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 SEC11BP0C7V7 166 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 GZMBP10144 247 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 ZNF708P17019 499 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 FSTP19883 344 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 TNFRSF4P43489 277 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 NPY4RP50391 375 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 UBE2KP61086 200 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 SPEM2Q0P670 501 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 LANCL3Q6ZV70 420 aa11.65□□□□□ -0.54
NUP54-201ENST00000264883 CACUL1Q86Y37 369 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms