RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ZNF808Q8N4W9 903 aaPredicted RBP23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 LINC01560Q8TB33 94 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 SGK3Q96BR1 496 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 RADILQ96JH8 1075 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 C12orf57Q99622 126 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 NPDC1Q9NQX5 325 aaPredicted RBP23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 UBQLN2Q9UHD9 624 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 USP9XQ93008 2570 aaPredicted RBP23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 PQLC2LA1A4F0 135 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 C5orf49A4QMS7 147 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 H3BSH0 61 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 CX3CR1P49238 355 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 SEZ6L2Q6UXD5 910 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 ZNF367Q7RTV3 350 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 WFDC8Q8IUA0 241 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 ZNF283Q8N7M2 679 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 DUSP18Q8NEJ0 188 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 SORCS2Q96PQ0 1159 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 BEX2Q9BXY8 128 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 SLC22A13Q9Y226 551 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 MRPS7Q9Y2R9 242 aaKnown RBP23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 AMDHD2Q9Y303 409 aa23.83■■□□□ 1.41
SMARCD3-201ENST00000262188 SRSF10O75494 262 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 CBR1P16152 277 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 PLP2Q04941 152 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 CCDC36Q8IYA8 594 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 PRSS35Q8N3Z0 413 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 MUCL1Q96DR8 90 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 KCNJ15Q99712 375 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 SERPINA5P05154 406 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 PLA2G2AP14555 144 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 SLC6A9P48067 706 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 HCFC1P51610 2035 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 ZNF121P58317 390 aaPredicted RBP23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 TSTQ16762 297 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 MRPL48Q96GC5 212 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 OR51B6Q9H340 312 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 ST6GALNAC2Q9UJ37 374 aa23.82■■□□□ 1.4
SMARCD3-201ENST00000262188 IGHV1-18A0A0C4DH31 117 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 IQCMA0A1B0GVH7 501 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 TMEM269A0A1B0GVZ9 245 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 M0R135 149 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 IGKV3-15P01624 115 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 TACSTD2P09758 323 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 CLEC2LP0C7M8 214 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 TATDN3Q17R31 274 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 LIPKQ5VXJ0 399 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 SLC30A7Q8NEW0 376 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 ZNF799Q96GE5 643 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 POM121L2Q96KW2 1035 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 MED18Q9BUE0 208 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 FRRS1LQ9P0K9 344 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 ZNF319Q9P2F9 582 aa23.81■■□□□ 1.4
SMARCD3-201ENST00000262188 C19orf84I3L1E1 186 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 M0R1B8 84 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 CECR9P0C854 216 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 CELP19835 753 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 NUP62P37198 522 aaPredicted RBP23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 GRB2P62993 217 aaKnown RBP23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 MZT2BQ6NZ67 158 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 DEGS2Q6QHC5 323 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 ARL9Q6T311 187 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 DPPA2Q7Z7J5 298 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 FAM206AQ9NX38 181 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 ACSM4P0C7M7 580 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 OTX1P32242 354 aaPredicted RBP23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 KIR3DL2P43630 455 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 KRTAP27-1Q3LI81 207 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 WDR38Q5JTN6 314 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 CLRN3Q8NCR9 226 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 PDCD1LG2Q9BQ51 273 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 CLEC4MQ9H2X3 399 aaPredicted RBP23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 OBP2BQ9NPH6 170 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 TRIM36Q9NQ86 728 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 R4GMQ9 66 aa23.8■■□□□ 1.4
SMARCD3-201ENST00000262188 ANXA2P07355 339 aaKnown RBP23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 SLC3A1Q07837 685 aa23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 ZMYND11Q15326 602 aa23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 SSX1Q16384 188 aa23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 FAM57BQ71RH2 274 aa23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 OR2G2Q8NGZ5 317 aa23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 PPIL3Q9H2H8 161 aaKnown RBP23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 STUB1Q9UNE7 303 aa23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 ALG5Q9Y673 324 aa23.79■■□□□ 1.4
SMARCD3-201ENST00000262188 AGAP20933 346 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 APLNRP35414 380 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 GDI2P50395 445 aaKnown RBP23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 PSMA6P60900 246 aaKnown RBP23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 BAK1Q16611 211 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 SNAI3Q3KNW1 292 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 RHOUQ7L0Q8 258 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 SPTSSAQ969W0 71 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 C11orf54Q9H0W9 315 aaPredicted RBP23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 G6PC2Q9NQR9 355 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 ADAM30Q9UKF2 790 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 IGLV1-44P01699 117 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 PRSS12P56730 875 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 ECH1Q13011 328 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 ZMAT1Q5H9K5 638 aa23.78■■□□□ 1.4
SMARCD3-201ENST00000262188 PRSS45Q7RTY3 260 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms