RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SLCO1C1Q9NYB5 712 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 GDF2Q9UK05 429 aaPredicted RBP12.9□□□□□ -0.34
CUX2-201ENST00000261726 OPN1MWP04001 364 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 OPN1MW2P0DN77 364 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 OPN1MW3P0DN78 364 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 RHOBP62745 196 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 FAM3AP98173 230 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 PAX5Q02548 391 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 GAMTQ14353 236 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 PDCD1Q15116 288 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 TMEM207Q6UWW9 146 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 NPEPL1Q8NDH3 523 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 OR4S1Q8NGB4 309 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 PLEKHA2Q9HB19 425 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 SBF2Q86WG5 1849 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 DEFB108AA8MXU0 73 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 DNASE2O00115 360 aaPredicted RBP12.9□□□□□ -0.34
CUX2-201ENST00000261726 GPX5O75715 221 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 GABRB1P18505 474 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 OPRK1P41145 380 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 DUSP8Q13202 625 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 CTU2Q2VPK5 515 aaKnown RBP12.9□□□□□ -0.34
CUX2-201ENST00000261726 ELFN2Q5R3F8 820 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 AGBL4Q5VU57 503 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 BLNKQ8WV28 456 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 MED30Q96HR3 178 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 GSX2Q9BZM3 304 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 ZDHHC5Q9C0B5 715 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 TXNIPQ9H3M7 391 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 PLEKHB1Q9UF11 243 aaPredicted RBP12.9□□□□□ -0.34
CUX2-201ENST00000261726 TRAPPC1Q9Y5R8 145 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 MKRN2OSH3BPM6 223 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 RNF224P0DH78 156 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 STAC2Q6ZMT1 411 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
CUX2-201ENST00000261726 DSCR3O14972 297 aa12.9□□□□□ -0.35
CUX2-201ENST00000261726 HSBP1O75506 76 aa12.9□□□□□ -0.35
CUX2-201ENST00000261726 TM4SF4P48230 202 aa12.9□□□□□ -0.35
CUX2-201ENST00000261726 OR52N4Q8NGI2 321 aa12.9□□□□□ -0.35
CUX2-201ENST00000261726 WBP2Q969T9 261 aa12.9□□□□□ -0.35
CUX2-201ENST00000261726 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.35
CUX2-201ENST00000261726 CST7O76096 145 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 PPP1CBP62140 327 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 NHLH1Q02575 133 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 NHLH2Q02577 135 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 TPBGQ13641 420 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ANKRD34AQ69YU3 496 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 CADM3Q8N126 398 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 VAMP8Q9BV40 100 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 CLEC1BQ9P126 229 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ICAM5Q9UMF0 924 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 CYC1P08574 325 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 MGMTP16455 207 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 BMI1P35226 326 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 DIO1P49895 249 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 RAB1AP62820 205 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 DHRS11Q6UWP2 260 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 KLHDC1Q8N7A1 406 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 A0A1W2PR80 420 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 TMPRSS11DO60235 418 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ZGLP1P0C6A0 271 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 FAHP16930 419 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ZNF628Q5EBL2 1059 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 GALNT16Q8N428 558 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 BAHD1Q8TBE0 780 aaPredicted RBP12.89□□□□□ -0.35
CUX2-201ENST00000261726 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ARID1BQ8NFD5 2236 aaPredicted RBP12.89□□□□□ -0.35
CUX2-201ENST00000261726 A0A1W2PNV4 684 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ZBTB42B2RXF5 422 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 M0R1X1 148 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 LYG2Q86SG7 212 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 SLC38A6Q8IZM9 456 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 PELI1Q96FA3 418 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ALKBH3Q96Q83 286 aaPredicted RBP12.89□□□□□ -0.35
CUX2-201ENST00000261726 URB1O60287 2271 aaKnown RBP12.89□□□□□ -0.35
CUX2-201ENST00000261726 TNFRSF10CO14798 259 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 PHOX2AO14813 284 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 SLC25A5P05141 298 aaKnown RBP12.89□□□□□ -0.35
CUX2-201ENST00000261726 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
CUX2-201ENST00000261726 FABP5Q01469 135 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 ZNF485Q8NCK3 441 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 RTN4IP1Q8WWV3 396 aaPredicted RBP12.89□□□□□ -0.35
CUX2-201ENST00000261726 SYT11Q9BT88 431 aa12.89□□□□□ -0.35
CUX2-201ENST00000261726 BMP5P22003 454 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ADPRHL1Q8NDY3 354 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 MSL2Q9HCI7 577 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 VMA21Q3ZAQ7 101 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 DLEU7Q6UYE1 221 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
CUX2-201ENST00000261726 TEX50A0A1B0GTY4 177 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 FCMRO60667 390 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 DCTDP32321 178 aa12.88□□□□□ -0.35
CUX2-201ENST00000261726 ASAH1Q13510 395 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms