RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 CDC14CA4D256 554 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 H3BQ15 152 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 FXYD1O00168 92 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 F12P00748 615 aaPredicted RBP6.5□□□□□ -1.37
HERC2-201ENST00000261609 ATF1P18846 271 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 CXCL2P19875 107 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 CLDN17P56750 224 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 UBE2G1P62253 170 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 ZNF468Q5VIY5 522 aaPredicted RBP6.5□□□□□ -1.37
HERC2-201ENST00000261609 FBXO34Q9NWN3 711 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 PLA1AQ53H76 456 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 PABPC1L2AQ5JQF8 200 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 PARS2Q7L3T8 475 aaKnown RBP6.5□□□□□ -1.37
HERC2-201ENST00000261609 PLCE1Q9P212 2302 aa6.5□□□□□ -1.37
HERC2-201ENST00000261609 CREBBPQ92793 2442 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 HSBP1O75506 76 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 GSTP1P09211 210 aaKnown RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 LIMS3P0CW19 117 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 LIMS4P0CW20 117 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 RTL10Q7L3V2 364 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 TMEM104Q8NE00 496 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 HS3ST1O14792 307 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SPINT2O43291 252 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 TEX101Q9BY14 249 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 HEYLQ9NQ87 328 aaPredicted RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 FTSJ1Q9UET6 329 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 NAGKQ9UJ70 344 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 B4DEV8 164 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 PGA3P0DJD8 388 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 DGAT2L6Q6ZPD8 337 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 ADPRHL1Q8NDY3 354 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 GPR32P1Q8NGA4 272 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 OR2AE1Q8NHA4 323 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 ZC3HAV1LQ96H79 300 aaKnown RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 CACFD1Q9UGQ2 172 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 NXPH2O95156 264 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 PMP22Q01453 160 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 FAAP24Q9BTP7 215 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SLCO1C1Q9NYB5 712 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 BMPR1BO00238 502 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 GSTZ1O43708 216 aaPredicted RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 CD99P14209 185 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 OPRM1P35372 400 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 WDR73Q6P4I2 378 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SLC16A11Q8NCK7 471 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 LIN7CQ9NUP9 197 aaKnown RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 HS3ST2Q9Y278 367 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 R4GMQ9 66 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 CACNA1EQ15878 2313 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 ST8SIA5O15466 376 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SPINK4O60575 86 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 AMTP48728 403 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 MED25Q71SY5 747 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 PRRX2Q99811 253 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 LAMB1P07942 1786 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 HOXD9P28356 352 aaPredicted RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 PPOXP50336 477 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 RUNX3Q13761 415 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 NKAIN2Q5VXU1 208 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 PIGTQ969N2 578 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 GDE1Q9NZC3 331 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 DOCK8Q8NF50 2099 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 ZNF814B7Z6K7 855 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 MRPS24Q96EL2 167 aaKnown RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 INSM2Q96T92 566 aaPredicted RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 SEMA6CQ9H3T2 930 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 TAF1P21675 1872 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 C4orf47A7E2U8 309 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 ABCD4O14678 606 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SLC25A4P12235 298 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 PPP1R1AQ13522 171 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 PNLIPRP3Q17RR3 467 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 ADAMTSL4Q6UY14 1074 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 RAB29O14966 203 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SOX15O60248 233 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 MRPL33O75394 65 aaKnown RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 OR2J2O76002 312 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 B3GALT4O96024 378 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 HOXD4P09016 255 aaPredicted RBP6.49□□□□□ -1.37
HERC2-201ENST00000261609 CRISP2P16562 243 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 C17orf67Q0P5P2 114 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 FAM78BQ5VT40 261 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 TMPRSS11FQ6ZWK6 438 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 C17orf78Q8N4C9 275 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 IGLV3-10A0A075B6K4 115 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 LINC00587B1AMM8 73 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 IL3RAP26951 378 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.49□□□□□ -1.371e-6■■■■■ 29.8
HERC2-201ENST00000261609 ADAM11O75078 769 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 EGR3Q06889 387 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 DUSP8Q13202 625 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SP6Q3SY56 376 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 LRIT1Q9P2V4 623 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 SSUH2Q9Y2M2 353 aa6.49□□□□□ -1.37
HERC2-201ENST00000261609 HPXP02790 462 aa6.48□□□□□ -1.37
HERC2-201ENST00000261609 CSN1S1P47710 185 aa6.48□□□□□ -1.37
HERC2-201ENST00000261609 ABHD17CQ6PCB6 329 aa6.48□□□□□ -1.37
HERC2-201ENST00000261609 SIRT5Q9NXA8 310 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms