RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 ZDHHC16Q969W1 377 aa13.96□□□□□ -0.17
CGREF1-201ENST00000260595 CCDC124Q96CT7 223 aaKnown RBP13.96□□□□□ -0.17
CGREF1-201ENST00000260595 TLNRD1Q9H1K6 362 aa13.96□□□□□ -0.17
CGREF1-201ENST00000260595 C1orf21Q9H246 121 aa13.96□□□□□ -0.17
CGREF1-201ENST00000260595 OR51V1Q9H2C8 321 aa13.96□□□□□ -0.17
CGREF1-201ENST00000260595 DNAJC27Q9NZQ0 273 aa13.96□□□□□ -0.17
CGREF1-201ENST00000260595 DUX4Q9UBX2 424 aa13.96□□□□□ -0.17
CGREF1-201ENST00000260595 RHBDD3Q9Y3P4 386 aa13.96□□□□□ -0.17
CGREF1-201ENST00000260595 FAM107AO95990 144 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 MUC1P15941 1255 aaPredicted RBP13.95□□□□□ -0.18
CGREF1-201ENST00000260595 OMGP23515 440 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 CFL1P23528 166 aaKnown RBP13.95□□□□□ -0.18
CGREF1-201ENST00000260595 GINS1Q14691 196 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 OTOSQ8NHW6 89 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 CANT1Q8WVQ1 401 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 OTULINQ96BN8 352 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 ITPKCQ96DU7 683 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 SEH1LQ96EE3 360 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 LRGUKQ96M69 825 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 SLITRK2Q9H156 845 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 OR10A2Q9H208 303 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 BRD7Q9NPI1 651 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 MMP24Q9Y5R2 645 aa13.95□□□□□ -0.18
CGREF1-201ENST00000260595 MGAM2Q2M2H8 2515 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 FAM181BA6NEQ2 426 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 SELENOFO60613 162 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 TIPRLO75663 272 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 ECDO95905 644 aaPredicted RBP13.94□□□□□ -0.18
CGREF1-201ENST00000260595 MELTFP08582 738 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 H2BFMP0C1H6 154 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 AMY2BP19961 511 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 ACKR3P25106 362 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 ARF6P62330 175 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 CDK5Q00535 292 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 PDCD1Q15116 288 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 MICBQ29980 383 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 METTL11BQ5VVY1 283 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 PLBD1Q6P4A8 553 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 GALNT4Q8N4A0 578 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 TMEM86BQ8N661 226 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 CCDC197Q8NCU1 140 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 LY6G5BQ8NDX9 201 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 CSNK2A3Q8NEV1 391 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 PGAM5Q96HS1 289 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 FAM71F1Q96KD3 344 aaPredicted RBP13.94□□□□□ -0.18
CGREF1-201ENST00000260595 CCL13Q99616 98 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 RGCCQ9H4X1 137 aa13.94□□□□□ -0.18
CGREF1-201ENST00000260595 PDP1Q9P0J1 537 aaPredicted RBP13.94□□□□□ -0.18
CGREF1-201ENST00000260595 RPUSD1Q9UJJ7 312 aaKnown RBP13.94□□□□□ -0.18
CGREF1-201ENST00000260595 IGHV1-69DA0A0B4J2H0 117 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 AQP12BA6NM10 295 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 PRR23D1E9PI22 279 aaPredicted RBP13.93□□□□□ -0.18
CGREF1-201ENST00000260595 CDIPTO14735 213 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 IGHV1-69P01742 117 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 LYNP07948 512 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 PRR23D2P0DMB1 279 aaPredicted RBP13.93□□□□□ -0.18
CGREF1-201ENST00000260595 PAICSP22234 425 aaKnown RBP13.93□□□□□ -0.18
CGREF1-201ENST00000260595 POU1F1P28069 291 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 RELBQ01201 579 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 GFOD2Q3B7J2 385 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 WDR38Q5JTN6 314 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 FIP1L1Q6UN15 594 aaKnown RBP13.93□□□□□ -0.18
CGREF1-201ENST00000260595 AQP12AQ8IXF9 295 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 HS3ST5Q8IZT8 346 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 ZNF454Q8N9F8 522 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 GATAD2BQ8WXI9 593 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 ST8SIA4Q92187 359 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 LHX4Q969G2 390 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 LYZL4Q96KX0 146 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 THTPAQ9BU02 230 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 PAPOLGQ9BWT3 736 aaKnown RBP13.93□□□□□ -0.18
CGREF1-201ENST00000260595 CHIAQ9BZP6 476 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 FGF23Q9GZV9 251 aaPredicted RBP13.93□□□□□ -0.18
CGREF1-201ENST00000260595 CNTD2Q9H8S5 307 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 TNFRSF19Q9NS68 423 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 ACOXLQ9NUZ1 547 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 KIF17Q9P2E2 1029 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 KLHDC2Q9Y2U9 406 aa13.93□□□□□ -0.18
CGREF1-201ENST00000260595 TRRAPQ9Y4A5 3859 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 CST4P01036 141 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 HMGN1P05114 100 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 OSMP13725 252 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 PRKACGP22612 351 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 GNALP38405 381 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 NAA10P41227 235 aaPredicted RBP13.92□□□□□ -0.18
CGREF1-201ENST00000260595 TGM4P49221 684 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 IL5RAQ01344 420 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 FAM76BQ5HYJ3 339 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 ATPAF1Q5TC12 328 aaPredicted RBP13.92□□□□□ -0.18
CGREF1-201ENST00000260595 CPOQ8IVL8 374 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 FAM216BQ8N7L0 139 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 THEM6Q8WUY1 208 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 OR5P3Q8WZ94 311 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 C12orf43Q96C57 262 aaKnown RBP13.92□□□□□ -0.18
CGREF1-201ENST00000260595 C1RLQ9NZP8 487 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 MPC1Q9Y5U8 109 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 KPTNQ9Y664 436 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 POMT1Q9Y6A1 747 aa13.92□□□□□ -0.18
CGREF1-201ENST00000260595 GNGT2O14610 69 aa13.91□□□□□ -0.18
CGREF1-201ENST00000260595 PRODHO43272 600 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms