RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 LHX4Q969G2 390 aa11.93□□□□□ -0.5
RABEPK-201ENST00000259460 NEIL1Q96FI4 390 aaPredicted RBP11.93□□□□□ -0.5
RABEPK-201ENST00000259460 C9orf16Q9BUW7 83 aa11.93□□□□□ -0.5
RABEPK-201ENST00000259460 C1orf198Q9H425 327 aa11.93□□□□□ -0.5
RABEPK-201ENST00000259460 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
RABEPK-201ENST00000259460 TVP23AA6NH52 213 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 FAM183AA6NL82 134 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 C22orf46C9J442 243 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 SURF4O15260 269 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 ENSAO43768 121 aaKnown RBP11.92□□□□□ -0.5
RABEPK-201ENST00000259460 SNAP29O95721 258 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 ZNF823P16415 610 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 SPI1P17947 270 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 CCNOP22674 350 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 PITPNBP48739 271 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 CDK5Q00535 292 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 AQP6Q13520 282 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 RCN1Q15293 331 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 SNAPC1Q16533 368 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 PDZD9Q8IXQ8 264 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 OR8B3Q8NGG8 313 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 OR4C13Q8NGP0 309 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 OR1J2Q8NGS2 313 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 OR2T6Q8NHC8 308 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 OR8B2Q96RD0 313 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 OSBPL10Q9BXB5 764 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 OR2H1Q9GZK4 316 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 MSL2Q9HCI7 577 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 CYSLTR2Q9NS75 346 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 TVP23BQ9NYZ1 205 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 MIOXQ9UGB7 285 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 ZDHHC8Q9ULC8 765 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 FAM96BQ9Y3D0 163 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 TIMM10BQ9Y5J6 103 aa11.92□□□□□ -0.5
RABEPK-201ENST00000259460 ZNF879B4DU55 563 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 SGCEO43556 437 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 ZNF205O95201 554 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 CLUP10909 449 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 MMP9P14780 707 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 FMO3P31513 532 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 HTR5AP47898 357 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 GDI2P50395 445 aaKnown RBP11.91□□□□□ -0.5
RABEPK-201ENST00000259460 SLC25A1P53007 311 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 RAD23AP54725 363 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 RPS7P62081 194 aaKnown RBP11.91□□□□□ -0.5
RABEPK-201ENST00000259460 LSM6P62312 80 aaKnown RBP11.91□□□□□ -0.5
RABEPK-201ENST00000259460 PSG4Q00888 419 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 PTGES3Q15185 160 aaKnown RBP11.91□□□□□ -0.5
RABEPK-201ENST00000259460 KLHL12Q53G59 568 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 SYT9Q86SS6 491 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 LINC00346Q8IVM7 164 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 CBR4Q8N4T8 237 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 OR2AJ1Q8NGZ0 328 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 EME1Q96AY2 570 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 RCC1LQ96I51 464 aaKnown RBP11.91□□□□□ -0.5
RABEPK-201ENST00000259460 ASCL2Q99929 193 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 CITED2Q99967 270 aaPredicted RBP11.91□□□□□ -0.5
RABEPK-201ENST00000259460 WNT5BQ9H1J7 359 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 OR51V1Q9H2C8 321 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 CLN8Q9UBY8 286 aa11.91□□□□□ -0.5
RABEPK-201ENST00000259460 M0R129 80 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 CPT2P23786 658 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 STOMP27105 288 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 ALDH3A2P51648 485 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 KCNMB1Q16558 191 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 ZNF718Q3SXZ3 478 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 ZMAT1Q5H9K5 638 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 PLBD1Q6P4A8 553 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 LYPD4Q6UWN0 246 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 ZBTB49Q6ZSB9 765 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 NLRC3Q7RTR2 1065 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 PPP1R35Q8TAP8 253 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 DPF1Q92782 380 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 WACQ9BTA9 647 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 GABARAPL3Q9BY60 117 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 USE1Q9NZ43 259 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
RABEPK-201ENST00000259460 NDRG4Q9ULP0 352 aaKnown RBP11.9□□□□□ -0.5
RABEPK-201ENST00000259460 PPP1R3CQ9UQK1 317 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 COMMD3-BMI1R4GMX3 469 aa11.9□□□□□ -0.5
RABEPK-201ENST00000259460 C5orf49A4QMS7 147 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 H0YHG0 523 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 TMEM178BH3BS89 294 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 ZFPL1O95159 310 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 ALPLP05186 524 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 FBP1P09467 338 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 SPARCP09486 303 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 EPHA2P29317 976 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 KIR2DS4P43632 304 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 MMP16P51512 607 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 PLECQ15149 4684 aaKnown RBP11.89□□□□□ -0.51
RABEPK-201ENST00000259460 ZIK1Q3SY52 487 aaPredicted RBP11.89□□□□□ -0.51
RABEPK-201ENST00000259460 SLX4IPQ5VYV7 408 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 CORO6Q6QEF8 472 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 ERI1Q8IV48 349 aaKnown RBP11.89□□□□□ -0.51
RABEPK-201ENST00000259460 CPOQ8IVL8 374 aa11.89□□□□□ -0.51
RABEPK-201ENST00000259460 GJC3Q8NFK1 279 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms