RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 C7orf66A4D0T2 115 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 AQP7O14520 342 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 LPLP06858 475 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 COX5BP10606 129 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 GSK3AP49840 483 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 RAB25P57735 213 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 ACTBP60709 375 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 ACTG1P63261 375 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 FAPQ12884 760 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 PCGF3Q3KNV8 242 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 TMEM255AQ5JRV8 349 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 ATAD3CQ5T2N8 411 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 GLIPR1L1Q6UWM5 242 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 RNF144BQ7Z419 303 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 OR56B4Q8NH76 319 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 C1orf147Q96MC9 270 aaPredicted RBP24.08■■□□□ 1.45
CCM2-201ENST00000258781 GPER1Q99527 375 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 GLRX2Q9NS18 164 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 LHX6Q9UPM6 363 aa24.08■■□□□ 1.45
CCM2-201ENST00000258781 SVILO95425 2214 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 MAP1BP46821 2468 aaKnown RBP24.07■■□□□ 1.44
CCM2-201ENST00000258781 H2AFB2P0C5Z0 115 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 OR3A4PP47883 348 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 FOXG1P55316 489 aaPredicted RBP24.07■■□□□ 1.44
CCM2-201ENST00000258781 UBE2V2Q15819 145 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 MOGAT2Q3SYC2 334 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 C9orf135Q5VTT2 229 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 ZNF101Q8IZC7 436 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 PNLDC1Q8NA58 520 aaKnown RBP24.07■■□□□ 1.44
CCM2-201ENST00000258781 OR2AE1Q8NHA4 323 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 KCNG3Q8TAE7 436 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 ZCCHC14Q8WYQ9 949 aaKnown RBP24.07■■□□□ 1.44
CCM2-201ENST00000258781 ITFG2Q969R8 447 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 SEH1LQ96EE3 360 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 GMPPAQ96IJ6 420 aaPredicted RBP24.07■■□□□ 1.44
CCM2-201ENST00000258781 GAL3ST1Q99999 423 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 LUZP4Q9P127 313 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 RAB27BO00194 218 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 PSMB1P20618 241 aaKnown RBP24.07■■□□□ 1.44
CCM2-201ENST00000258781 ALDH3B1P43353 468 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 RIPPLY1Q0D2K3 151 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 KISS1Q15726 138 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 FGD2Q7Z6J4 655 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 ACBD4Q8NC06 268 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 CPEB3Q8NE35 698 aaKnown RBP24.07■■□□□ 1.44
CCM2-201ENST00000258781 C1QTNF5Q9BXJ0 243 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 CLCF1Q9UBD9 225 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 GHRLQ9UBU3 117 aa24.07■■□□□ 1.44
CCM2-201ENST00000258781 A0A096LPE4 126 aa24.06■■□□□ 1.44
CCM2-201ENST00000258781 A0A1W2PPZ6 126 aa24.06■■□□□ 1.44
CCM2-201ENST00000258781 FAM189A2Q15884 450 aa24.06■■□□□ 1.44
CCM2-201ENST00000258781 PLEKHN1Q494U1 663 aaPredicted RBP24.06■■□□□ 1.44
CCM2-201ENST00000258781 SFRP4Q6FHJ7 346 aaPredicted RBP24.06■■□□□ 1.44
CCM2-201ENST00000258781 XRCC2O43543 280 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 SS18L1O75177 396 aaPredicted RBP24.05■■□□□ 1.44
CCM2-201ENST00000258781 ARR3P36575 388 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 RRAS2P62070 204 aaPredicted RBP24.05■■□□□ 1.44
CCM2-201ENST00000258781 P4HA3Q7Z4N8 544 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 DPPA2Q7Z7J5 298 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 AQP3Q92482 292 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 AKAP1Q92667 903 aaKnown RBP eCLIP24.05■■□□□ 1.44
CCM2-201ENST00000258781 C20orf85Q9H1P6 137 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 B3GNT2Q9NY97 397 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 PRSS50Q9UI38 385 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 MED12LQ86YW9 2145 aa24.05■■□□□ 1.44
CCM2-201ENST00000258781 TLN1Q9Y490 2541 aaKnown RBP24.05■■□□□ 1.44
CCM2-201ENST00000258781 ACKR3P25106 362 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 MPGP29372 298 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 OR3A2P47893 321 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 FBXW9Q5XUX1 488 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 ZNF107Q9UII5 783 aaPredicted RBP24.04■■□□□ 1.44
CCM2-201ENST00000258781 A0A0A6YYJ9 748 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 CHRM2P08172 466 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 FAM87AP0C7U9 286 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 ZNF260Q3ZCT1 412 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 TMEM53Q6P2H8 277 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 CRIP3Q6Q6R5 217 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 COLCA1Q6ZS62 124 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 SPSB4Q96A44 273 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 SPSB1Q96BD6 273 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 GHITMQ9H3K2 345 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 C12orf49Q9H741 205 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 ZNF71Q9NQZ8 489 aaPredicted RBP24.04■■□□□ 1.44
CCM2-201ENST00000258781 PLSCR2Q9NRY7 297 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 MCUBQ9NWR8 336 aa24.04■■□□□ 1.44
CCM2-201ENST00000258781 ZNHIT1O43257 154 aa24.03■■□□□ 1.44
CCM2-201ENST00000258781 HLA-HP01893 362 aa24.03■■□□□ 1.44
CCM2-201ENST00000258781 AKAIN1P0CW23 69 aa24.03■■□□□ 1.44
CCM2-201ENST00000258781 LPAR5Q9H1C0 372 aa24.03■■□□□ 1.44
CCM2-201ENST00000258781 NEK6Q9HC98 313 aa24.03■■□□□ 1.44
CCM2-201ENST00000258781 hCG_38984A0A1B0GV85 526 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 CDC14BO60729 498 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 MELTFP08582 738 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 NAT2P11245 290 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 GTF2F2P13984 249 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 PTGFRP43088 359 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 LINC00303Q3SY05 128 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 OR4C16Q8NGL9 310 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 SARAFQ96BY9 339 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 MYO7BQ6PIF6 2116 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms