RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 GNALP38405 381 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 RIDAP52758 137 aaKnown RBP19.17■□□□□ 0.66
LSM4-201ENST00000252816 KRTAP24-1Q3LI83 254 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 DCDC5Q6ZRR9 648 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 C1QL2Q7Z5L3 287 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 PHC2Q8IXK0 858 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 OR1M1Q8NGA1 313 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 OR8J1Q8NGP2 316 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 TMEM158Q8WZ71 300 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 UBE2FQ969M7 185 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 EME1Q96AY2 570 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 ITPKCQ96DU7 683 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 NEIL1Q96FI4 390 aaPredicted RBP19.17■□□□□ 0.66
LSM4-201ENST00000252816 MNTQ99583 582 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 PBOV1Q9GZY1 135 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 WARS2Q9UGM6 360 aaKnown RBP19.17■□□□□ 0.66
LSM4-201ENST00000252816 ZNF391Q9UJN7 358 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 INSIG2Q9Y5U4 225 aa19.17■□□□□ 0.66
LSM4-201ENST00000252816 STAB1Q9NY15 2570 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 A0A0U1RQV5 110 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 hCG_1807616A0A1W2PRN6 198 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 E9PQ18 207 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 LGALS8O00214 317 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 SRSF10O75494 262 aaKnown RBP19.16■□□□□ 0.66
LSM4-201ENST00000252816 APOL3O95236 402 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 CST4P01036 141 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 ZNF12P17014 697 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 EGR1P18146 543 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 ALDH3A2P51648 485 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 CSNK2BP67870 215 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 PAX2Q02962 417 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 ZNF154Q13106 437 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 PRDX4Q13162 271 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 SSX6Q7RTT6 188 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 CBR4Q8N4T8 237 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 GCSAMQ8N6F7 178 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 OR8B3Q8NGG8 313 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 OR8B2Q96RD0 313 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 FGF23Q9GZV9 251 aaPredicted RBP19.16■□□□□ 0.66
LSM4-201ENST00000252816 S100A14Q9HCY8 104 aa19.16■□□□□ 0.66
LSM4-201ENST00000252816 MRM2Q9UI43 246 aaKnown RBP19.16■□□□□ 0.66
LSM4-201ENST00000252816 ZNF850A8MQ14 1090 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 ZNF670-ZNF695F2Z2N8 137 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 FSHBP01225 129 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 LHBP01229 141 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 IGLV3-1P01715 115 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 PSMB10P40306 273 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 PITPNBP48739 271 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 CDC42P60953 191 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 GNB2P62879 340 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 SNCBQ16143 134 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 ZNF829Q3KNS6 432 aaPredicted RBP19.15■□□□□ 0.66
LSM4-201ENST00000252816 ZIK1Q3SY52 487 aaPredicted RBP19.15■□□□□ 0.66
LSM4-201ENST00000252816 ZNF841Q6ZN19 808 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 PLEKHG7Q6ZR37 379 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 C10orf67Q8IYJ2 551 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 GALNT4Q8N4A0 578 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 FTMTQ8N4E7 242 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 TEX29Q8N6K0 151 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 FAM81AQ8TBF8 368 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 OR51E1Q8TCB6 317 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 PIGCQ92535 297 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 TBX5Q99593 518 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 OR5V1Q9UGF6 321 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 NUFIP1Q9UHK0 495 aaKnown RBP19.15■□□□□ 0.66
LSM4-201ENST00000252816 ORC6Q9Y5N6 252 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 MPC1Q9Y5U8 109 aa19.15■□□□□ 0.66
LSM4-201ENST00000252816 OOEPA6NGQ2 149 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 PHYHO14832 338 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 TNFRSF13BO14836 293 aaPredicted RBP19.14■□□□□ 0.65
LSM4-201ENST00000252816 TCF21O43680 179 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 EPHA1P21709 976 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 IL5RAQ01344 420 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 EGR3Q06889 387 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 WDR82Q6UXN9 313 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 NLRC3Q7RTR2 1065 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 NANPQ8TBE9 248 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 HPSE2Q8WWQ2 592 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 OR5P3Q8WZ94 311 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 DACT3Q96B18 629 aaPredicted RBP19.14■□□□□ 0.65
LSM4-201ENST00000252816 FAM71F1Q96KD3 344 aaPredicted RBP19.14■□□□□ 0.65
LSM4-201ENST00000252816 HRASLS5Q96KN8 279 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 RAB3IPQ96QF0 476 aaPredicted RBP19.14■□□□□ 0.65
LSM4-201ENST00000252816 MICU1Q9BPX6 476 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 TLNRD1Q9H1K6 362 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 OCEL1Q9H607 264 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 GPR84Q9NQS5 396 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 CTSZQ9UBR2 303 aa19.14■□□□□ 0.65
LSM4-201ENST00000252816 A0A1W2PQL4 384 aaPredicted RBP19.13■□□□□ 0.65
LSM4-201ENST00000252816 ANXA2P2A6NMY6 339 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 TTRP02766 147 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 WDR25Q64LD2 544 aaPredicted RBP19.13■□□□□ 0.65
LSM4-201ENST00000252816 KRT74Q7RTS7 529 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 FAM90A1Q86YD7 464 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 SPATA3Q8NHX4 192 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 LRRC29Q8WV35 223 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 MBOAT4Q96T53 435 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 RNPEPL1Q9HAU8 725 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.13■□□□□ 0.65
LSM4-201ENST00000252816 CLN8Q9UBY8 286 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms