RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ST6GALNAC5Q9BVH7 336 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 GSN-AS1Q9NRJ2 163 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 POMT1Q9Y6A1 747 aa13.72□□□□□ -0.21
DDX55-201ENST00000238146 PHF3Q92576 2039 aaKnown RBP13.71□□□□□ -0.21
DDX55-201ENST00000238146 OR3A2P47893 321 aa13.71□□□□□ -0.21
DDX55-201ENST00000238146 ARFRP1Q13795 201 aa13.71□□□□□ -0.21
DDX55-201ENST00000238146 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.71□□□□□ -0.21
DDX55-201ENST00000238146 TGM7Q96PF1 710 aa13.71□□□□□ -0.21
DDX55-201ENST00000238146 ZNF251Q9BRH9 671 aa13.71□□□□□ -0.21
DDX55-201ENST00000238146 LRRC61Q9BV99 259 aa13.71□□□□□ -0.21
DDX55-201ENST00000238146 RPS10P5Q9NQ39 176 aa13.71□□□□□ -0.21
DDX55-201ENST00000238146 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
DDX55-201ENST00000238146 RANBP2P49792 3224 aaKnown RBP13.71□□□□□ -0.21
DDX55-201ENST00000238146 A0A1W2PPE3 182 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 TCRBV21S2A2A0A5A6 115 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 S100A9P06702 114 aaKnown RBP13.71□□□□□ -0.22
DDX55-201ENST00000238146 S100A6P06703 90 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 POLR2GP62487 172 aaKnown RBP eCLIP13.71□□□□□ -0.22
DDX55-201ENST00000238146 RNF212Q495C1 297 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 LYPD6BQ8NI32 183 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 CNTNAP3Q9BZ76 1288 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 CUTCQ9NTM9 273 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 SLCO1B1Q9Y6L6 691 aa13.71□□□□□ -0.22
DDX55-201ENST00000238146 FIGNL2A6NMB9 653 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 CRTAPO75718 401 aaPredicted RBP13.7□□□□□ -0.22
DDX55-201ENST00000238146 GABRG2P18507 467 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 AGAP20933 346 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 ANOS1P23352 680 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 RPL12P30050 165 aaKnown RBP13.7□□□□□ -0.22
DDX55-201ENST00000238146 DHPSP49366 369 aaPredicted RBP13.7□□□□□ -0.22
DDX55-201ENST00000238146 TLE3Q04726 772 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 C9orf50Q5SZB4 431 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 OR56B1Q8NGI3 324 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 RHBDD1Q8TEB9 315 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 FBXO17Q96EF6 278 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 KPTNQ9Y664 436 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 LINC01565O15544 149 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 SLC2A1P11166 492 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 ZNF17P17021 662 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 SNU13P55769 128 aaKnown RBP13.7□□□□□ -0.22
DDX55-201ENST00000238146 TSC22D1Q15714 1073 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 ABHD12BQ7Z5M8 362 aaPredicted RBP13.7□□□□□ -0.22
DDX55-201ENST00000238146 COMMD2Q86X83 199 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 ZNF561Q8N587 486 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 MFSD8Q8NHS3 518 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 MAFIPQ8WZ33 124 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 SEBOXQ9HB31 216 aaPredicted RBP13.7□□□□□ -0.22
DDX55-201ENST00000238146 NIT2Q9NQR4 276 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 EHFQ9NZC4 300 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 FBXL17Q9UF56 701 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 MEMO1Q9Y316 297 aa13.7□□□□□ -0.22
DDX55-201ENST00000238146 ATG2AQ2TAZ0 1938 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 NPIPB13A6NJU9 1138 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 C10orf142B7Z368 130 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 NPIPB4C9JG80 1138 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 K7EPK0 472 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 BIDP55957 195 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 CSNK2A1P68400 391 aaPredicted RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 TGIF1Q15583 401 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 NSDHLQ15738 373 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 PRSS58Q8IYP2 241 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 FAM71E2Q8N5Q1 922 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 CSNK2A3Q8NEV1 391 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 TCEAL3Q969E4 200 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 ZNF304Q9HCX3 659 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 ZNF319Q9P2F9 582 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 B3GALT5Q9Y2C3 310 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 THADAQ6YHU6 1953 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 JTBO76095 146 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 KNG1P01042 644 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 GAPDHP04406 335 aaKnown RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 HCKP08631 526 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 FCGR2CP31995 323 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 PTGER4P35408 488 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 HSD11B2P80365 405 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 IAH1Q2TAA2 248 aaPredicted RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 FAM209BQ5JX69 171 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 TMPRSS9Q7Z410 1059 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 PNLDC1Q8NA58 520 aaKnown RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 DAZLQ92904 295 aaKnown RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 EMG1Q92979 244 aaKnown RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 C5orf34Q96MH7 638 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 PARP12Q9H0J9 701 aaKnown RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 CHST11Q9NPF2 352 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 GPR84Q9NQS5 396 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 RPH3AQ9Y2J0 694 aaPredicted RBP13.69□□□□□ -0.22
DDX55-201ENST00000238146 LHFPL6Q9Y693 200 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 SZT2Q5T011 3432 aa13.69□□□□□ -0.22
DDX55-201ENST00000238146 TMEM33P57088 247 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 DMRTC1Q5HYR2 192 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 GKN2Q86XP6 184 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 LINC00469Q8N7U9 141 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 ZNF441Q8N8Z8 693 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 OR8B12Q8NGG6 310 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 OR1N1Q8NGS0 311 aa13.68□□□□□ -0.22
DDX55-201ENST00000238146 ISOC2Q96AB3 205 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms