RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CCR4P51679 360 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 RAP1BP61224 184 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 RPS18P62269 152 aaKnown RBP18.18■□□□□ 0.5
SNX3-201ENST00000230085 RAP1AP62834 184 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 ZNF117Q03924 483 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 PRSS58Q8IYP2 241 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 OR4S1Q8NGB4 309 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 OR4D6Q8NGJ1 314 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 ZNF563Q8TA94 476 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 STT3BQ8TCJ2 826 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 ST7LQ8TDW4 575 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 RCC2Q9P258 522 aaKnown RBP18.18■□□□□ 0.5
SNX3-201ENST00000230085 IL17BQ9UHF5 180 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 MMACHCQ9Y4U1 282 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 CSAG2Q9Y5P2 127 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 WIF1Q9Y5W5 379 aa18.18■□□□□ 0.5
SNX3-201ENST00000230085 IGLV3-12A0A075B6K2 115 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 OR2W5A6NFC9 320 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 ALG1L2C9J202 215 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 TAAR5O14804 337 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 SLC16A7O60669 478 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 KLF7O75840 302 aaPredicted RBP18.17■□□□□ 0.5
SNX3-201ENST00000230085 HLA-DQA2P01906 255 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 GSTP1P09211 210 aaKnown RBP18.17■□□□□ 0.5
SNX3-201ENST00000230085 LIFP15018 202 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 MAOAP21397 527 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 CAV2P51636 162 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 ZP4Q12836 540 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 FAM189A2Q15884 450 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 LRRC37A5PQ49AS3 106 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 EIF5AL1Q6IS14 154 aaKnown RBP18.17■□□□□ 0.5
SNX3-201ENST00000230085 DNM1P34Q6PK57 102 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 PEG10Q86TG7 708 aaKnown RBP18.17■□□□□ 0.5
SNX3-201ENST00000230085 SLC22A24Q8N4F4 322 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 GATSQ8NAP1 163 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 SLC26A10Q8NG04 563 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 NRIP2Q9BQI9 281 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 SLC26A1Q9H2B4 701 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 FN3KRPQ9HA64 309 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 RAXQ9Y2V3 346 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 VSTM2BA6NLU5 285 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 TMEM14DPA8MWL7 114 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 C21orf140B9A014 251 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 PLGP00747 810 aaPredicted RBP18.17■□□□□ 0.5
SNX3-201ENST00000230085 IGKV3-11P04433 115 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 PGCP20142 388 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 IL15RAQ13261 267 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 UNC119Q13432 240 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 BEX5Q5H9J7 111 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 JAGN1Q8N5M9 183 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 ADIPOR1Q96A54 375 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 SCGB3A2Q96PL1 93 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 SPSB2Q99619 263 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 GPR132Q9UNW8 380 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 SLC5A6Q9Y289 635 aa18.17■□□□□ 0.5
SNX3-201ENST00000230085 MEX3AA1L020 520 aaKnown RBP18.16■□□□□ 0.5
SNX3-201ENST00000230085 OR6C76A6NM76 312 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 PLPP3O14495 311 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 SERPINF1P36955 418 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 POLR2HP52434 150 aaKnown RBP18.16■□□□□ 0.5
SNX3-201ENST00000230085 ARHGDIBP52566 201 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 GPR85P60893 370 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 PLEKHN1Q494U1 663 aaPredicted RBP18.16■□□□□ 0.5
SNX3-201ENST00000230085 TMEM88Q6PEY1 159 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 CD163Q86VB7 1156 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 CBLN2Q8IUK8 224 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 ZSCAN4Q8NAM6 433 aaPredicted RBP18.16■□□□□ 0.5
SNX3-201ENST00000230085 TERB2Q8NHR7 220 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 NUDCD2Q8WVJ2 157 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 ZCCHC14Q8WYQ9 949 aaKnown RBP18.16■□□□□ 0.5
SNX3-201ENST00000230085 DCUN1D4Q92564 292 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 PPP1R14AQ96A00 147 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 GPR87Q9BY21 358 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 TGIF2Q9GZN2 237 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 NXF5Q9H1B4 397 aaKnown RBP18.16■□□□□ 0.5
SNX3-201ENST00000230085 ASH2LQ9UBL3 628 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 TCFL5Q9UL49 500 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 GTF2A1LQ9UNN4 478 aa18.16■□□□□ 0.5
SNX3-201ENST00000230085 PTRH2Q9Y3E5 179 aaKnown RBP18.16■□□□□ 0.5
SNX3-201ENST00000230085 PCP4L1A6NKN8 68 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 A8MVM7 634 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 CD5P06127 495 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 HRH1P35367 487 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 ATXN7L3Q14CW9 347 aaPredicted RBP18.15■□□□□ 0.5
SNX3-201ENST00000230085 NUBPLQ8TB37 319 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 PAQR8Q8TEZ7 354 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 PTPMT1Q8WUK0 201 aaPredicted RBP18.15■□□□□ 0.5
SNX3-201ENST00000230085 SFT2D1Q8WV19 159 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 SLC39A7Q92504 469 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 ZNF775Q96BV0 537 aaPredicted RBP18.15■□□□□ 0.5
SNX3-201ENST00000230085 OR5B2Q96R09 309 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 CNTD2Q9H8S5 307 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 WDR54Q9H977 334 aa18.15■□□□□ 0.5
SNX3-201ENST00000230085 MYEF2Q9P2K5 600 aaKnown RBP18.15■□□□□ 0.5
SNX3-201ENST00000230085 TPRP12270 2363 aaKnown RBP18.15■□□□□ 0.5
SNX3-201ENST00000230085 C17orf105B2RV13 164 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 H0YIZ8 118 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 OR2T1O43869 369 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 SSX5O60225 188 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 SFT2D2O95562 160 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms