RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 TAF9BQ9HBM6 251 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 SUSD2Q9UGT4 822 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 ANAPC10Q9UM13 185 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 FREM2Q5SZK8 3169 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 IGKV1D-8A0A087WSZ0 117 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 IGKV1-9A0A0C4DH69 117 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 CEACAM18A8MTB9 384 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 CRTAPO75718 401 aaPredicted RBP10.95□□□□□ -0.66
NUP88-201ENST00000225696 KNG1P01042 644 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 APOC1P02654 83 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 HKR1P10072 659 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 TBPP20226 339 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 SWI5Q1ZZU3 235 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 VAX1Q5SQQ9 334 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 BTNL8Q6UX41 500 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 PEG10Q86TG7 708 aaKnown RBP10.95□□□□□ -0.66
NUP88-201ENST00000225696 NAA40Q86UY6 237 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 MISPQ8IVT2 679 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 ZNF441Q8N8Z8 693 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 NPRL2Q8WTW4 380 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 C14orf79Q96F83 325 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 BSCL2Q96G97 398 aaPredicted RBP10.95□□□□□ -0.66
NUP88-201ENST00000225696 SMIM3Q9BZL3 60 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 FANCFQ9NPI8 374 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 GPR84Q9NQS5 396 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 GPR27Q9NS67 375 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 SRPK3Q9UPE1 567 aa10.95□□□□□ -0.66
NUP88-201ENST00000225696 MFNGO00587 321 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 TO15178 435 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 RER1O15258 196 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 DAOP14920 347 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 ZNF44P15621 663 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 ZNF708P17019 499 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 ZNF20P17024 532 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 HYAL1Q12794 435 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 CDCP2Q5VXM1 449 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 CRIP3Q6Q6R5 217 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 KLHL24Q6TFL4 600 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.94□□□□□ -0.66
NUP88-201ENST00000225696 LHFPL1Q86WI0 220 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 OR8B12Q8NGG6 310 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 OR1N1Q8NGS0 311 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 ISOC2Q96AB3 205 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 C2orf50Q96LR7 162 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 TMEM59Q9BXS4 323 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 VN1R1Q9GZP7 353 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 DZANK1Q9NVP4 752 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 B3GAT1Q9P2W7 334 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 FBLN5Q9UBX5 448 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 OSGIN2Q9Y236 505 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 MMACHCQ9Y4U1 282 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 DMDP11532 3685 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
NUP88-201ENST00000225696 A6NIZ1 184 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 NUDT19A8MXV4 375 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 ZNF205O95201 554 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 AMY2BP19961 511 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 KLK2P20151 261 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 FASLGP48023 281 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 PPT1P50897 306 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 RAP1BP61224 184 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 RAP1AP62834 184 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 KIAA0895LQ68EN5 471 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 Q6ZS52 159 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 GALNTL5Q7Z4T8 443 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 ARRDC1Q8N5I2 433 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 OR5H2Q8NGV7 314 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 LMX1AQ8TE12 382 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 C5orf34Q96MH7 638 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 CACFD1Q9UGQ2 172 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 EDARQ9UNE0 448 aa10.94□□□□□ -0.66
NUP88-201ENST00000225696 FPR2P25090 351 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 ADH6P28332 368 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 PTGER4P35408 488 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 GSK3AP49840 483 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 DAP3P51398 398 aaKnown RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 SNU13P55769 128 aaKnown RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 ZNF121P58317 390 aaPredicted RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 ACY1Q03154 408 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 FOXF1Q12946 379 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 ARFRP1Q13795 201 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 DEFB133Q30KQ1 61 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 TMEM268Q5VZI3 342 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CARD17Q5XLA6 110 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 DNM1P34Q6PK57 102 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 OR10H5Q8NGA6 315 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 OR1L3Q8NH93 324 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 HIST1H2BAQ96A08 127 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 KLHDC7BQ96G42 594 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 LIN37Q96GY3 246 aaPredicted RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 IP6K3Q96PC2 410 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 CDC6Q99741 560 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 OCSTAMPQ9BR26 566 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 EHFQ9NZC4 300 aa10.93□□□□□ -0.66
NUP88-201ENST00000225696 MED19A0JLT2 244 aaPredicted RBP10.93□□□□□ -0.66
NUP88-201ENST00000225696 TLCD2A6NGC4 264 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms