RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 LAMTOR5O43504 91 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 GP1BAP07359 652 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 DUX4L2P0CJ85 424 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 DUX4L3P0CJ86 424 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 DUX4L4P0CJ87 422 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 DUX4L5P0CJ88 424 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 DUX4L6P0CJ89 424 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 DUX4L7P0CJ90 424 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 ZNF93P35789 620 aaPredicted RBP11.58□□□□□ -0.56
CTNS-201ENST00000046640 ACOT7LQ6ZUV0 252 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 MOB3CQ70IA8 216 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 LYG2Q86SG7 212 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 OR5D14Q8NGL3 314 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 OXGR1Q96P68 337 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 ALX4Q9H161 411 aaPredicted RBP11.58□□□□□ -0.56
CTNS-201ENST00000046640 DUX4Q9UBX2 424 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 CSAG2Q9Y5P2 127 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 FRYQ5TBA9 3013 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 FAM186AA6NE01 2351 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 A0A1B0GTI1 187 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 ZNF878C9JN71 531 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 RAB27BO00194 218 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 COX6A1P12074 109 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 OTX2P32243 289 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 SERPINF1P36955 418 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 OR3A4PP47883 348 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 CX3CR1P49238 355 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 DEGS2Q6QHC5 323 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.58□□□□□ -0.56
CTNS-201ENST00000046640 TMED6Q8WW62 240 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 ZNF837Q96EG3 531 aaPredicted RBP11.58□□□□□ -0.56
CTNS-201ENST00000046640 B3GALT1Q9Y5Z6 326 aa11.58□□□□□ -0.56
CTNS-201ENST00000046640 OR5H15A6NDH6 313 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 METTL21EPA6NDL7 271 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 ZNF98A6NK75 572 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 TNFSF11O14788 317 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 LDLRAD4O15165 306 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 SNAPC5O75971 98 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 DKK1O94907 266 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 MPIG6BO95866 241 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 HCKP08631 526 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 FGF5P12034 268 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 ZBTB25P24278 435 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 CBX5P45973 191 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 NPY4RP50391 375 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 PAN3Q58A45 887 aaKnown RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 PUSL1Q8N0Z8 303 aaKnown RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 GTPBP8Q8N3Z3 284 aaPredicted RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 RNF138Q8WVD3 245 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 GPER1Q99527 375 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 PHB2Q99623 299 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 SLC26A1Q9H2B4 701 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 TREM1Q9NP99 234 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 PRELID3BQ9Y3B1 194 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 PRRC2CQ9Y520 2896 aaKnown RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 MYO7BQ6PIF6 2116 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 TMEM265A0A087WTH1 108 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 A0A0G2JMM0 328 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 A0A1W2PPB8 328 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 A0A1W2PRS3 328 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 MPTX1A8MV57 137 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 KIR3DP1A8MWS1 328 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 C9J4A7 227 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 ADAP1O75689 374 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 OR2F2O95006 317 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 CD8AP01732 235 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 OR2F1Q13607 317 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 SLC25A53Q5H9E4 307 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 C1orf100Q5SVJ3 147 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 HAGHLQ6PII5 290 aaPredicted RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 GLIPR1L1Q6UWM5 242 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 YRDCQ86U90 279 aaKnown RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 MAFIPQ8WZ33 124 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 TMEM41AQ96HV5 264 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 GUCD1Q96NT3 240 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 MLXQ9UH92 298 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 DKKL1Q9UK85 242 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 RHBDD3Q9Y3P4 386 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 NSG1A0A0A6YYJ2 146 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 F8W036 122 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 ABCD4O14678 606 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 DBHP09172 617 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 BLOC1S1P78537 153 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 IL11RAQ14626 422 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 PLEKHN1Q494U1 663 aaPredicted RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 RPS19BP1Q86WX3 136 aaKnown RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 DTX1Q86Y01 620 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 ZFP82Q8N141 532 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 SLC22A24Q8N4F4 322 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 EIF4E3Q8N5X7 224 aaKnown RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 OR6X1Q8NH79 312 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 FOXRED1Q96CU9 486 aaPredicted RBP11.57□□□□□ -0.56
CTNS-201ENST00000046640 SLC17A5Q9NRA2 495 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 KCNK7Q9Y2U2 307 aa11.57□□□□□ -0.56
CTNS-201ENST00000046640 AQP7P3A6NL99 342 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 ETV2O00321 342 aaPredicted RBP11.56□□□□□ -0.56
CTNS-201ENST00000046640 RIPPLY1Q0D2K3 151 aa11.56□□□□□ -0.56
CTNS-201ENST00000046640 ZNF260Q3ZCT1 412 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms